BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZC02FM1.SCF screened BAC_end (939 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1775 1594 0.0 >3x_Contig1775 Length = 26320 Score = 1594 bits (804), Expect = 0.0 Identities = 834/842 (99%), Gaps = 3/842 (0%) Strand = Plus / Plus Query: 87 tcataccatttcgtttccgtctccttcttttgatgtccttcatcgcgggccactattctg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23941 tcataccatttcgtttccgtctccttcttttgatgtccttcatcgcgggccactattctg 24000 Query: 147 gaagatctctttcttctgaccattagagcttgcatagactgttgtttcaatctgttagca 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24001 gaagatctctttcttctgaccattagagcttgcatagactgttgtttcaatctgttagca 24060 Query: 207 tacaatttacgtccgtaaacctctgcctctgcatggtattctattaagccttggaaaaat 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24061 tacaatttacgtccgtaaacctctgcctctgcatggtattctattaagccttggaaaaat 24120 Query: 267 tcttgaaaatcaatatcatctatcgtttgtagatattcgacgaagcttctataatcatgt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24121 tcttgaaaatcaatatcatctatcgtttgtagatattcgacgaagcttctataatcatgt 24180 Query: 327 gctaacgtttcataatcgatcttgacatcatttaaataggcgtcgatctcatcggaataa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24181 gctaacgtttcataatcgatcttgacatcatttaaataggcgtcgatctcatcggaataa 24240 Query: 387 tccaaatgaattacgtctatagtggcttctgtctcttcgacaagaacacaattctgtaac 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24241 tccaaatgaattacgtctatagtggcttctgtctcttcgacaagaacacaattctgtaac 24300 Query: 447 tttataggtatgttcaatccgtttgattctggtttgaccgatacctgtttccttataatc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24301 tttataggtatgttcaatccgtttgattctggtttgaccgatacctgtttccttataatc 24360 Query: 507 tttccagtgggtaagaccaccaaagaggtagcatcattctcccaaatctcagggaattgg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24361 tttccagtgggtaagaccaccaaagaggtagcatcattctcccaaatctcagggaattgg 24420 Query: 567 aagctatccaaatggttttgtaaatagttcctaaaaccaatgttctttctttctaccaat 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24421 aagctatccaaatggttttgtaaatagttcctaaaaccaatgttctttctttctaccaat 24480 Query: 627 ttaatgacatggaaaatgatctcgaactgttttaatatgttgagatccgcgaatttgcta 686 ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 24481 ttaatgacatggaaaatgatctcgaactgttgtaatatgttgagatccgcgaatctgcta 24540 Query: 687 ttgatatcctctgtgtaccaaagtagagatttgtttaatttcgaattaaaaatgtggtac 746 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 24541 ttgatatcctctgtgtaccaaagtagagatttgtttaattccgaattaaaaatgtggtac 24600 Query: 747 ttcactatttcatcccaatgtttcaaggataccgtcttatcctgttctaaagacctgatc 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24601 ttcactatttcatcccaatgtttcaaggataccgtcttatcctgttctaaagacctgatc 24660 Query: 807 aacctcaacaagatactcttgaataaattcagtatatgaccctcttcgtcctgatccgtg 866 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24661 aacctcaacaagatactcttgaataaattcagtatatgaccctcttcgtcctgatccgtg 24720 Query: 867 ctgcccccatttggatcctncgattgaa-caaatccaacgaa--cttttcgagactccat 923 ||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| Sbjct: 24721 ctgcccccatttggatcctccgattgaaccaaatccaacgaatcattttcgagactccat 24780 Query: 924 cc 925 || Sbjct: 24781 cc 24782 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6847 Number of Sequences: 1807 Number of extensions: 6847 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 939 length of database: 10,358,551 effective HSP length: 16 effective length of query: 923 effective length of database: 10,329,639 effective search space: 9534256797 effective search space used: 9534256797 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)