BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZC04RM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1394 1635 0.0 >3x_Contig1394 Length = 5721 Score = 1635 bits (825), Expect = 0.0 Identities = 845/853 (99%) Strand = Plus / Minus Query: 49 taccgttccaacactgacgataagtacttgtgtacttggggtattgacagtgcctacgtc 108 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 856 taccgttccaacactgacgaaaagtacttgtgtacttggggtattgacagtgcctacgtc 797 Query: 109 gttaacgaattgtctgacgtcgtctccatctgtagaaccgattacccaggtactgaaaac 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 gttaacgaattgtctgacgtcgtctccatctgtagaaccgattacccaggtactgaaaac 737 Query: 169 atggttatcccaactattgtcaacggtggtagcaagttaccattgaccgttgtcgaccag 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 atggttatcccaactattgtcaacggtggtagcaagttaccattgaccgttgtcgaccag 677 Query: 229 gatacatactacacatggcaaggaatgaagacatcggctcaatactacgttaacaatgct 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 gatacatactacacatggcaaggaatgaagacatcggctcaatactacgttaacaatgct 617 Query: 289 ggtgtttctaaggaggatggttgtgtctggggtacttctgggtctggtattggtaactgg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 ggtgtttctaaggaggatggttgtgtctggggtacttctgggtctggtattggtaactgg 557 Query: 349 gctccattgaacttcggtgctggtgccactggcggtatctcttatctgtctttgattcca 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 gctccattgaacttcggtgctggtgccactggcggtatctcttatctgtctttgattcca 497 Query: 409 aacccaaacaaccgtgaagcagccaacttcaacgtcaagattgttgcagctgacggtggt 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 aacccaaacaaccgtgaagcagccaacttcaacgtcaagattgttgcagctgacggtggt 437 Query: 469 agcgtcatcggagaatgtgtttacgaaaacggttcctacaacggtggtagcgatggttgt 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 agcgtcatcggagaatgtgtttacgaaaacggttcctacaacggtggtagcgatggttgt 377 Query: 529 accgtttcagtgacttctggtgctgctaatttcgttttatacgattaatgactcttttca 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 accgtttcagtgacttctggtgctgctaatttcgttttatacgattaatgactcttttca 317 Query: 589 gaggcattggcgggatgttatttaccgttgctgtttttcttttcttccctagtctgctat 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 gaggcattggcgggatgttatttaccgttgctgtttttcttttcttccctagtctgctat 257 Query: 649 ctgaatcctctgtatctgtcaaaaattgaaatggaactaacatcattaatggtgtcatgt 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 ctgaatcctctgtatctgtcaaaaattgaaatggaactaacatcattaatggtgtcatgt 197 Query: 709 tgtgcgtgtgtgcatatttttgtgagtactatctncatganagcacgaagcattttcaat 768 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 196 tgtgcgtgtgtgcatatttttgtgagtactatctccatgaaagcacgaagcattttcaat 137 Query: 769 cgacctantagaatgtaccctcattgcgtctcgtacgttttggcatggcaccatcttccg 828 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 cgacctataagaatgtaccctcattgcgtctcgtacgttttggcatggcaccatcttccg 77 Query: 829 atgttncattacactctccatttcattctgaatgagtatagaagaattgagttgctcaat 888 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 atgtttcattacactctccatttcattctgaatgagtatagaagaattgagttgctcaat 17 Query: 889 tcccaccccgcga 901 ||| |||| |||| Sbjct: 16 tccaacccggcga 4 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5569 Number of Sequences: 1807 Number of extensions: 5569 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)