BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZC07FM1.SCF screened BAC_end (956 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1451 1594 0.0 >3x_Contig1451 Length = 8346 Score = 1594 bits (804), Expect = 0.0 Identities = 839/849 (98%), Gaps = 2/849 (0%) Strand = Plus / Minus Query: 91 gtcaccggatttggttcagttattatttttcattggatatggaaacttcggagttgagtg 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6559 gtcaccggatttggttcagttattatttttcattggatatggaaacttcggagttgagtg 6500 Query: 151 gtccgttcccgtctcggatgattgtggtccgatggacaagctgattcgaaggccctttcg 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6499 gtccgttcccgtctcggatgattgtggtccgatggacaagctgattcgaaggccctttcg 6440 Query: 211 ttctctttacggcaggttagcaaggccgtaagctcatcgcttgggtatgtccacgagcta 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6439 ttctctttacggcaggttagcaaggccgtaagctcatcgcttgggtatgtccacgagcta 6380 Query: 271 cactctctgtacggatagtttcttagcaccgtcaacaagattaaggaactgaatggtgta 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6379 cactctctgtacggatagtttcttagcaccgtcaacaagattaaggaactgaatggtgta 6320 Query: 331 ttgtttcattatggtacaggattgcaccggagcactgtatttgtggagctacttgtgcta 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6319 ttgtttcattatggtacaggattgcaccggagcactgtatttgtggagctacttgtgcta 6260 Query: 391 acagcacgagagtgcccaatttatttcatcaagtaagtttagctgcgaatatataaagta 450 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6259 acagcacgagagt-cccaatttatttcatcaagtaagtttagctgcgaatatataaagta 6201 Query: 451 aagctgtagatggaggatagacttgtcattcgagaattggtttgaattggattcagttgc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6200 aagctgtagatggaggatagacttgtcattcgagaattggtttgaattggattcagttgc 6141 Query: 511 gaataattcttttaacatacagatatagaaaaccaatcatcaacattgattgatacgagc 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6140 gaataattcttttaacatacagatatagaaaaccaatcatcaacattgattgatacgagc 6081 Query: 571 aaaacagaataacaactaacatcagcgttttcaaacggttaatataatgtcttttgactt 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6080 aaaacagaataacaactaacatcagcgttttcaaacggttaatataatgtcttttgactt 6021 Query: 631 aacagatcactcacatgcacgttacaatccattgactgattcttggattttggtatctcc 690 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6020 aacagatcactcacatgcacgttacaatccattgactgattcttggattttggtatctcc 5961 Query: 691 acatagagccaagagaccatggttaggtcaacaggagaaacctggtagaaacgatgctcc 750 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5960 acatagagccaagagaccatggttaggtcaacaggagaaacctggtagaaacgatgctcc 5901 Query: 751 agaccacgacgataaatgctacttatgtnccggtactacncaggctacaggtgagcagaa 810 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 5900 agaccacgacgataaatgctacttatgtcccggtactaccagggctacaggtgagcagaa 5841 Query: 811 cccagattacgaatctacatatgtcttcactaacggctatccagctgtgaaattagaacc 870 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5840 cccagattacgaatctacatatgtcttcactaacggctatccagctgtgaaattagaaca 5781 Query: 871 accanatccagaactgacggtgtcgaattgcgacgcattgaaggagaga-tgtttcagtt 929 |||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 5780 accagatccagaactgacggtgtcgaattgcgacgcattgaaggagagattgttcaagtt 5721 Query: 930 gaaaggtgt 938 ||||||||| Sbjct: 5720 gaaaggtgt 5712 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5582 Number of Sequences: 1807 Number of extensions: 5582 Number of successful extensions: 21 Number of sequences better than 1.0e-20: 1 length of query: 956 length of database: 10,358,551 effective HSP length: 16 effective length of query: 940 effective length of database: 10,329,639 effective search space: 9709860660 effective search space used: 9709860660 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)