BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZC08RM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1776 1657 0.0 >3x_Contig1776 Length = 26138 Score = 1657 bits (836), Expect = 0.0 Identities = 894/911 (98%), Gaps = 3/911 (0%) Strand = Plus / Minus Query: 45 ctttgtccactttgttggatgcttagtggagagctgccaaccctgccactgtcagatggt 104 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10998 ctttgtccactttgttggatgctaagtggagagctgccaaccctgccactgtcagatggt 10939 Query: 105 tcaagaccgttgtcgcttccccaatcatctctgaagctttcggtaagaccgaattcgctg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10938 tcaagaccgttgtcgcttccccaatcatctctgaagctttcggtaagaccgaattcgctg 10879 Query: 165 aagaagctttgaaatacactcctccaaagaaggaaaagaaggaacaaccaatgtttggaa 224 ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 10878 aagaagctttgaaatacactcctccaaagaaggaaaagaaggaacaaccaaagaa-ggaa 10820 Query: 225 caaccaaagaagaaggaagaagctgctgccgctccagctccagctgctgaagccgaacaa 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10819 caaccaaagaagaaggaagaagctgctgccgctccagctccagctgctgaagccgaacaa 10760 Query: 285 ccaaagaagccaaagcatccattggaacttttgggtaaggccaccttcaacttggaagaa 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10759 ccaaagaagccaaagcatccattggaacttttgggtaaggccaccttcaacttggaagaa 10700 Query: 345 tggaagagaacttactctaacgaagacacaagaccagttgccttaccatggttctgggaa 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10699 tggaagagaacttactctaacgaagacacaagaccagttgccttaccatggttctgggaa 10640 Query: 405 cacttcaaccctgaagaatactccatctggaaggttggttacaaatacaacgatgaatta 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10639 cacttcaaccctgaagaatactccatctggaaggttggttacaaatacaacgatgaatta 10580 Query: 465 accttgactttcatgtccaacaacttagttggtggtttcttcaacagattgtccgcctct 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10579 accttgactttcatgtccaacaacttagttggtggtttcttcaacagattgtccgcctct 10520 Query: 525 gttaaatacatgttcggttgtctagtcgtttatggtgaaaacaacaacaacggtattgtc 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10519 gttaaatacatgttcggttgtctagtcgtttatggtgaaaacaacaacaacggtattgtc 10460 Query: 585 ggtgccatcgttgtccgtggtcaagactttgccccagccttcgatgtggctccagattgg 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10459 ggtgccatcgttgtccgtggtcaagactttgccccagccttcgatgtggctccagattgg 10400 Query: 645 gaatcctacgaatactccaagttggacccaacaaaggaagaagacaaggaattcatcaac 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10399 gaatcctacgaatactccaagttggacccaacaaaggaagaagacaaggaattcatcaac 10340 Query: 705 aacatgtgggcttgggataagccagttgttgttaacggtgaaaacaaggaaattgtcgat 764 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10339 aacatgtgggcttgggataagccagttgttgttaacggtgaaaacaaggaaattgtcgat 10280 Query: 765 ggtaaggtcttgaaataagcaagaatgttcactgcgctccaagc-atatttcatcaattc 823 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 10279 ggtaaggtcttgaaataagcaagatgtttcactgcgctccaagcaatatttcatcaattc 10220 Query: 824 ctaatctcgttttnttcacatactcttattttcaacctc-nagtacattttccacttctc 882 ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10219 ctaatctcgtttttttcacatactcttattttcaacctcttagtacattttccacttctc 10160 Query: 883 gggttgtataattaatttacgtacggcttttacttanntaaatctcatgaaatagaacac 942 || ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 10159 ggtttgtataattaatttacgtacggctttaacttagttaaatctcatgaaatagaacac 10100 Query: 943 gnaaacaatct 953 | ||||||||| Sbjct: 10099 gaaaacaatct 10089 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8311 Number of Sequences: 1807 Number of extensions: 8311 Number of successful extensions: 90 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)