BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZC12RM1.SCF screened BAC_end (978 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1497 1713 0.0 >3x_Contig1497 Length = 11582 Score = 1713 bits (864), Expect = 0.0 Identities = 908/916 (99%), Gaps = 5/916 (0%) Strand = Plus / Minus Query: 46 gcttacatgaacaatgggacgtcattcgatgtcaagagtaaaaaaatgtcaacagcacat 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1790 gcttacatgaacaatgggacgtcattcgatgtcaagagtaaaaaaatgtcaacagcacat 1731 Query: 106 ggttcgcaagtcatcattcaaagtaatttgaaaccaactttgaacgatctaaatcctcct 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1730 ggttcgcaagtcatcattcaaagtaatttgaaaccaactttgaacgatctaaatcctcct 1671 Query: 166 atgacttcttcgcaacttcagtacagtcctacgatgtctttaaaaggtggcattgggttc 225 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1670 atgacttcttcgcaacttcagtacagtcctacgatgtctttaaaaggtggcaa-gggttc 1612 Query: 226 taataaggtgaatatcatggctagtccagttcagatcaagttaagtgaaccaccggcttt 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611 gaataaggtgaatatcatggctagtccagttcagatcaagttaagtgaaccaccggcttt 1552 Query: 286 acgtgagactaaagccgttaagacatctaaatcaaagaaaaatggtgctggaggatctgg 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1551 acgtgagactaaagccgttaagacatctaaatcaaagaaaaatggtgctggaggatctgg 1492 Query: 346 ttctaacggtaagaatgaaatggtattcgtgaattactctgtgcaagacactatagaaac 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1491 ttctaacggtaagaatgaaatggtattcgtgaattactctgtgcaagacactatagaaac 1432 Query: 406 gcaaaagaagaagaagaaacaatctaagagggatcgaatgctgagaatttttaccggaaa 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1431 gcaaaagaagaagaagaaacaatctaagagggatcgaatgctgagaatttttaccggaaa 1372 Query: 466 taataacagtggtaataatgacggtaggtcagcttccagtcccggttcgagttcgacaat 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1371 taataacagtggtaataatgacggtaggtcagcttccagtcccggttcgagttcgacaat 1312 Query: 526 catagctagtaaaactttgactgttcagtctgcaccggcatctgccgccaagagaactta 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1311 catagctagtaaaactttgactgttcagtctgcaccggcatctgccgccaagagaactta 1252 Query: 586 tgggtctttcttgaaatgccacaggtataacccaagcaatgccgttgttgaatctgagca 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 tgggtctttcttgaaatgccacaggtataacccaagcaatgccgttgttgaatctgagca 1192 Query: 646 aatggatgaaatagttccaagatctgaacctattccaaatggacaaaaacctgctttgac 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1191 aatggatgaaatagttccaagatctgaacctattccaaatggacaaaaacctgctttgac 1132 Query: 706 aagatctgctagctctaacgtggctttggtgagaaacaatggtagatgctctttagccca 765 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1131 aagatctgctagctctaacgtggctttggtgagaaacaatggtagatgctctttagccca 1072 Query: 766 atcagctcagaaattcgtcaaaagcgaacaattggaaaagatggacttgctgaagtttaa 825 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1071 atcagctcagaaattcgtcaaaagcgaacaattggaaaagatggacttgctgaagtttaa 1012 Query: 826 tatagctaaatcagcaggtaatggagctcaaactgcaagtgttcatgctaacgcgttac- 884 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1011 tatagctaaatcagcaggtaatggagctcaaactgcaagtggtcatgctaacgcgttaca 952 Query: 885 aaacacaaagagtcagtcgaatattgagttgcgaatggttcc-accctaaag-tagagcc 942 |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 951 aaacacaaagagtcagtcgaatattgagttgcgaatggttccaaccctaaagttagagcc 892 Query: 943 -aatgggccatcaact 957 ||||||||||||||| Sbjct: 891 aaatgggccatcaact 876 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7802 Number of Sequences: 1807 Number of extensions: 7802 Number of successful extensions: 92 Number of sequences better than 1.0e-20: 1 length of query: 978 length of database: 10,358,551 effective HSP length: 16 effective length of query: 962 effective length of database: 10,329,639 effective search space: 9937112718 effective search space used: 9937112718 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)