BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC20ZC12RM1.SCF screened BAC_end
         (978 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1497                                                        1713   0.0  

>3x_Contig1497 
          Length = 11582

 Score = 1713 bits (864), Expect = 0.0
 Identities = 908/916 (99%), Gaps = 5/916 (0%)
 Strand = Plus / Minus

                                                                        
Query: 46   gcttacatgaacaatgggacgtcattcgatgtcaagagtaaaaaaatgtcaacagcacat 105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1790 gcttacatgaacaatgggacgtcattcgatgtcaagagtaaaaaaatgtcaacagcacat 1731

                                                                        
Query: 106  ggttcgcaagtcatcattcaaagtaatttgaaaccaactttgaacgatctaaatcctcct 165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1730 ggttcgcaagtcatcattcaaagtaatttgaaaccaactttgaacgatctaaatcctcct 1671

                                                                        
Query: 166  atgacttcttcgcaacttcagtacagtcctacgatgtctttaaaaggtggcattgggttc 225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 1670 atgacttcttcgcaacttcagtacagtcctacgatgtctttaaaaggtggcaa-gggttc 1612

                                                                        
Query: 226  taataaggtgaatatcatggctagtccagttcagatcaagttaagtgaaccaccggcttt 285
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1611 gaataaggtgaatatcatggctagtccagttcagatcaagttaagtgaaccaccggcttt 1552

                                                                        
Query: 286  acgtgagactaaagccgttaagacatctaaatcaaagaaaaatggtgctggaggatctgg 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1551 acgtgagactaaagccgttaagacatctaaatcaaagaaaaatggtgctggaggatctgg 1492

                                                                        
Query: 346  ttctaacggtaagaatgaaatggtattcgtgaattactctgtgcaagacactatagaaac 405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1491 ttctaacggtaagaatgaaatggtattcgtgaattactctgtgcaagacactatagaaac 1432

                                                                        
Query: 406  gcaaaagaagaagaagaaacaatctaagagggatcgaatgctgagaatttttaccggaaa 465
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1431 gcaaaagaagaagaagaaacaatctaagagggatcgaatgctgagaatttttaccggaaa 1372

                                                                        
Query: 466  taataacagtggtaataatgacggtaggtcagcttccagtcccggttcgagttcgacaat 525
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 taataacagtggtaataatgacggtaggtcagcttccagtcccggttcgagttcgacaat 1312

                                                                        
Query: 526  catagctagtaaaactttgactgttcagtctgcaccggcatctgccgccaagagaactta 585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1311 catagctagtaaaactttgactgttcagtctgcaccggcatctgccgccaagagaactta 1252

                                                                        
Query: 586  tgggtctttcttgaaatgccacaggtataacccaagcaatgccgttgttgaatctgagca 645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 tgggtctttcttgaaatgccacaggtataacccaagcaatgccgttgttgaatctgagca 1192

                                                                        
Query: 646  aatggatgaaatagttccaagatctgaacctattccaaatggacaaaaacctgctttgac 705
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 aatggatgaaatagttccaagatctgaacctattccaaatggacaaaaacctgctttgac 1132

                                                                        
Query: 706  aagatctgctagctctaacgtggctttggtgagaaacaatggtagatgctctttagccca 765
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 aagatctgctagctctaacgtggctttggtgagaaacaatggtagatgctctttagccca 1072

                                                                        
Query: 766  atcagctcagaaattcgtcaaaagcgaacaattggaaaagatggacttgctgaagtttaa 825
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 atcagctcagaaattcgtcaaaagcgaacaattggaaaagatggacttgctgaagtttaa 1012

                                                                        
Query: 826  tatagctaaatcagcaggtaatggagctcaaactgcaagtgttcatgctaacgcgttac- 884
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1011 tatagctaaatcagcaggtaatggagctcaaactgcaagtggtcatgctaacgcgttaca 952

                                                                        
Query: 885  aaacacaaagagtcagtcgaatattgagttgcgaatggttcc-accctaaag-tagagcc 942
            |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 951  aaacacaaagagtcagtcgaatattgagttgcgaatggttccaaccctaaagttagagcc 892

                            
Query: 943  -aatgggccatcaact 957
             |||||||||||||||
Sbjct: 891  aaatgggccatcaact 876


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7802
Number of Sequences: 1807
Number of extensions: 7802
Number of successful extensions: 92
Number of sequences better than 1.0e-20: 1
length of query: 978
length of database: 10,358,551
effective HSP length: 16
effective length of query: 962
effective length of database: 10,329,639
effective search space: 9937112718
effective search space used: 9937112718
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)