BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZD03RM1.SCF screened BAC_end (982 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1423 1703 0.0 >3x_Contig1423 Length = 8454 Score = 1703 bits (859), Expect = 0.0 Identities = 917/934 (98%), Gaps = 2/934 (0%) Strand = Plus / Plus Query: 48 tgactccttccccaatggatgtctacgccgactacgccactgcttccaagaagaagttgt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5511 tgactccttccccaatggatgtctacgccgactacgccactgcttccaagaagaagttgt 5570 Query: 108 aaatgtcatctttaaaatattataactgtgctgtatagatatttttttatagctgtcagt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5571 aaatgtcatctttaaaatattataactgtgctgtatagatatttttttatagctgtcagt 5630 Query: 168 atgttttctctgaaacaataatatattgttgacattttaccaattgttccttttttcttc 227 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 5631 atgttttctctgaaacaataatatattgttgacattttaccaattgttcctcttctcttc 5690 Query: 228 acaagctacatatcatatatattcacactcattataattgaccttaaccctttaggatcg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5691 acaagctacatatcatatatattcacactcattataattgaccttaaccctttaggatcg 5750 Query: 288 atcataataaatgatcaatatacgtgacaaactaactaaggg-aaactatatgactgtcc 346 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 5751 atcataataaatgatcaatatacgtgacaaactaactaaggggaaactatatgactgtcc 5810 Query: 347 tatacacttcgtagcaagaaaaaccagagaaaaagacatatggtaaaaaaaagagatagt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5811 tatacacttcgtagcaagaaaaaccagagaaaaagacatatggtaaaaaaaagagatagt 5870 Query: 407 gataaaatcaaggtaaaagggatttctcttatatgaccattagagtacaggtcaagatac 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5871 gataaaatcaaggtaaaagggatttctcttatatgaccattagagtacaggtcaagatac 5930 Query: 467 gccaatcatattaataggcttctggaatttaaacactgccagtctcttttttacagtagt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5931 gccaatcatattaataggcttctggaatttaaacactgccagtctcttttttacagtagt 5990 Query: 527 ctttcttccggttgaccttttttttttattactttacagtatttttttaccttttaagac 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5991 ctttcttccggttgaccttttttttttattactttacagtatttttttaccttttaagac 6050 Query: 587 tttttttttttttaataattaatagatataacactataataataattcaaataaaacagt 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6051 tttttttttttttaataattaatagatataacactataataataattcaaataaaacagt 6110 Query: 647 taaggatatcaccattaaatagagcggagtagattggaatgttaactcatcatcatagca 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6111 taaggatatcaccattaaatagagcggagtagattggaatgttaactcatcatcatagca 6170 Query: 707 tcgccatctacttcttgtccagcatgaactgactgtacgttagattctggtacagcaaat 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6171 tcgccatctacttcttgtccagcatgaactgactgtacgttagattctggtacagcaaat 6230 Query: 767 ggtctctcgttactcgaggaatttccactttcaatcagctgcggattgaaccanataccg 826 |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 6231 ggtctctcgttactcgaggaatttccacttccaatcagctgcggattgaaccaaataccg 6290 Query: 827 ttggtggtttctgtatcaggcttttttggcttttcaggcaatacccttttttggagatgc 886 |||||| |||||||||||||||||||||||||||||||||||||||||| | | ||||| Sbjct: 6291 ttggtgttttctgtatcaggcttttttggcttttcaggcaataccctttctggaggatgc 6350 Query: 887 ttgaataaacatccggtatgttttacattcagccccgtacctacaaggttcattgatagg 946 | |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 6351 tggaataaacatcc-gtatgttctacattcagccccgtacctacaaggttcattgatagg 6409 Query: 947 gtgacccgaaaggcaatctattcttgtacattgc 980 |||||| | ||||| |||||||||||||||||| Sbjct: 6410 gtgaccgaagaggcagtctattcttgtacattgc 6443 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 17,048 Number of Sequences: 1807 Number of extensions: 17048 Number of successful extensions: 190 Number of sequences better than 1.0e-20: 1 length of query: 982 length of database: 10,358,551 effective HSP length: 16 effective length of query: 966 effective length of database: 10,329,639 effective search space: 9978431274 effective search space used: 9978431274 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)