BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZD06FM1.SCF screened BAC_end (976 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1575 1574 0.0 >3x_Contig1575 Length = 11952 Score = 1574 bits (794), Expect = 0.0 Identities = 865/880 (98%), Gaps = 8/880 (0%) Strand = Plus / Plus Query: 87 tgaaatccaaccaccaacaaatttctcacggctataatgaatttttttcccttttcagtg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4972 tgaaatccaaccaccaacaaatttctcacggctataatgaatttttttcccttttcagtg 5031 Query: 147 ttaggaaaatcccaacagactaataaagacaactcccaactacggatatttcagtgaaag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5032 ttaggaaaatcccaacagactaataaagacaactcccaactacggatatttcagtgaaag 5091 Query: 207 ttgcaggggaccaaaagaaaaaacagcattccatcatgtgcaagaataacgaacgttgag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5092 ttgcaggggaccaaaagaaaaaacagcattccatcatgtgcaagaataacgaacgttgag 5151 Query: 267 aaaagtggtcatggcggcaaatatgaaaggacaggaagtccaattaaataggaatcagaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5152 aaaagtggtcatggcggcaaatatgaaaggacaggaagtccaattaaataggaatcagaa 5211 Query: 327 tatataaagcgatacatataagagacagaagggtaaattgtgtaaactgaagtcgccaag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5212 tatataaagcgatacatataagagacagaagggtaaattgtgtaaactgaagtcgccaag 5271 Query: 387 acactgaccatttctaagtattgtcgctggtcaaaccaaaccaaaactttcccaaactag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5272 acactgaccatttctaagtattgtcgctggtcaaaccaaaccaaaactttcccaaactag 5331 Query: 447 ctagttagaactcagataagtatgtgtcaacaaactaccagtatcttttgaagcaggact 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5332 ctagttagaactcagataagtatgtgtcaacaaactaccagtatcttttgaagcaggact 5391 Query: 507 tcagaaaagagagtaccaactcacagttgtatgaagaatcgaaagggaatttattgccac 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5392 tcagaaaagagagtaccaactcacagttgtatgaagaatcgaaagggaatttattgccac 5451 Query: 567 gtgacaggaattaagagaccgccttccctaagaaaccctctaactttgcctcctttccaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5452 gtgacaggaattaagagaccgccttccctaagaaaccctctaactttgcctcctttccaa 5511 Query: 627 tctgattgatcgtttctatcaaacttatctacgaggtttacaatatagcttagatggcat 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5512 tctgattgatcgtttctatcaaacttatctacgaggtttacaatatagcttagatggcat 5571 Query: 687 tatttcttgctgtttctctatatttcatggaattcgtcttttagccgncaattccatcta 746 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5572 tatttcttgctgtttctctatatttcatggaattcgtcttttagccgccaattccatcta 5631 Query: 747 aattgaaggatatggcagatttaccctaccctcttttctgtgggacttgaatatgatttt 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5632 aattgaaggatatggcagatttaccctaccctcttttctgtgggacttgaatatgatttt 5691 Query: 807 ttcctttgaaaag-atcagttggttagggtataacatt--aaaaaaaaataatggaactt 863 || |||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||| Sbjct: 5692 tt-ctttgaaaagaatcagttggttagggtaaaacattaaaaaaaaaaaaaatggaactt 5750 Query: 864 tttcagtatggcaaaatatgcctacgc-aagtatagagtat-atttttggtggatttggg 921 ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| || Sbjct: 5751 tttcagtatggcaaaatatgcctacgcaaagtatagagtataatttttgttggattttgg 5810 Query: 922 cctct-ttcttatattctgaaatcttc-actttttttttt 959 ||||| | || |||||||||||||||| |||||||||||| Sbjct: 5811 cctctatgctaatattctgaaatcttcaactttttttttt 5850 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9945 Number of Sequences: 1807 Number of extensions: 9945 Number of successful extensions: 94 Number of sequences better than 1.0e-20: 1 length of query: 976 length of database: 10,358,551 effective HSP length: 16 effective length of query: 960 effective length of database: 10,329,639 effective search space: 9916453440 effective search space used: 9916453440 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)