BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZD07FM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1706 1564 0.0 >3x_Contig1706 Length = 16303 Score = 1564 bits (789), Expect = 0.0 Identities = 852/869 (98%), Gaps = 5/869 (0%) Strand = Plus / Minus Query: 87 tggctgttttcgaaaggagtgttgagatttttcctccaagcgtatcgaagtctatttggg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10457 tggctgttttcgaaaggagtgttgagatttttcctccaagcgtatcgaagtctatttggg 10398 Query: 147 atatatatctggatgtggcactcaaagctgatatcactaaagagcaaaaaagagatattt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10397 atatatatctggatgtggcactcaaagctgatatcactaaagagcaaaaaagagatattt 10338 Query: 207 ttgaatctgctattaagcttgcagcttcaggagtggcatgtgtttcgttctttgaaaagt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10337 ttgaatctgctattaagcttgcagcttcaggagtggcatgtgtttcgttctttgaaaagt 10278 Query: 267 acagcgactttgagttaaaccttggtttccacgagagaagtgtcgagattttgcacaaag 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277 acagcgactttgagttaaaccttggtttccacgagagaagtgtcgagattttgcacaaag 10218 Query: 327 gagccaagaatatttcggatcttgaaagtaaatgtactttatgggaagaatgcatcaata 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10217 gagccaagaatatttcggatcttgaaagtaaatgtactttatgggaagaatgcatcaata 10158 Query: 387 gaagtg-aaaaacaattggacgtcaatcacaccagaaaactatatgaagaatgtatagaa 445 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10157 gaagtgcaaaaacaattggacgtcaatcacaccagaaaactatatgaagaatgtatagaa 10098 Query: 446 acattgcccaattctaaagcaatcaagtttctacttccatttgctatcttagaagaatcg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10097 acattgcccaattctaaagcaatcaagtttctacttccatttgctatcttagaagaatcg 10038 Query: 506 cgtaatgaggttgctcgttgtagagcattgttagactacgggagcaaattactgaagccc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10037 cgtaatgaggttgctcgttgtagagcattgttagactacgggagcaaattactgaagccc 9978 Query: 566 gcacagaatgaagaactttgggatttctggaggaatttcgaaactatgcacggtacaaaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9977 gcacagaatgaagaactttgggatttctggaggaatttcgaaactatgcacggtacaaaa 9918 Query: 626 gactcgttcaagaacatgctaaaagcacgtaggttcctagaggacacaatgaaagtaaat 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9917 gactcgttcaagaacatgctaaaagcacgtaggttcctagaggacacaatgaaagtaaat 9858 Query: 686 acagaggaagtatccagacatgcagatagcatcgaatttagggcgtcaactgcgaaaatt 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9857 acagaggaagtatccagacatgcagatagcatcgaatttagggcgtcaactgcgaaaatt 9798 Query: 746 agtggaagcggaccaccaagcgcagaagataaaggatactcanatacggctganattgan 805 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 9797 agtggaagcggaccaccaagcgcagaagataaaggatactcaaatacggctgaaattgat 9738 Query: 806 ttaggtctataaaatggatatatattgattaaagttgataatggcatatcgatcaatctc 865 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9737 ttaggtctataaaatggatatatattgattaaagttgataatggcatatcgatcaatctc 9678 Query: 866 ttatgntntgntttggaagatgtcgnattgggctttctttgatgaccgtgta-catacan 924 ||||| | || |||||||||||||| |||| |||||||||||||| ||||| |||||| Sbjct: 9677 ttatgttttgttttggaagatgtcgtattgt-ctttctttgatgac-gtgtaacatacaa 9620 Query: 925 aaccctta-tatcttactgtttttcgacc 952 || | || |||||||||||||||||||| Sbjct: 9619 aaacactagtatcttactgtttttcgacc 9591 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5864 Number of Sequences: 1807 Number of extensions: 5864 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)