BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZD07RM1.SCF screened BAC_end (954 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1100 1643 0.0 >3x_Contig1100 Length = 4703 Score = 1643 bits (829), Expect = 0.0 Identities = 867/877 (98%), Gaps = 3/877 (0%) Strand = Plus / Plus Query: 45 gcttagtctccaaagtttgtttcaattctcgaggatcaacataatcatactcaactccgt 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2973 gcttagtctccaaagtttgtttcaattctcgaggatcaacataatcatactcaactccgt 3032 Query: 105 aagcaggctgcaatatctttacattttctagcccaggaatcattctcatcataatttcct 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3033 aagcaggctgcaatatctttacattttctagcccaggaatcattctcatcataatttcct 3092 Query: 165 gaacatcctcaggcattgaattcgatattccatttggatatatgacgtctgtatttaacc 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3093 gaacatcctcaggcattgaattcgatattccatttggatatatgacgtctgtatttaacc 3152 Query: 225 cttcaggctccaaccatattctgtgcgaatctttgtcactaaatctgataattttagctt 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3153 cttcaggctccaaccatattctgtgcgaatctttgtcactaaatctgataattttagctt 3212 Query: 285 ctaaggacggacaatatcgaggacctttgacagtttctctaatatgaatagattgatgca 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3213 ctaaggacggacaatatcgaggacctttgacagtttctctaatatgaatagattgatgca 3272 Query: 345 aattaagctttaaataatcatgcaattcggaagtagtgcgtgtaccataacataaaattt 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3273 aattaagctttaaataatcatgcaattcggaagtagtgcgtgtaccataacataaaattt 3332 Query: 405 ggtctttgatactcacttcattattcatgtatgacattggatacggggggtcatcaccgt 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3333 ggtctttgatactcacttcattattcatgtatgacattggatacggggggtcatcaccgt 3392 Query: 465 attgtttttcaagattcgtaaaatcaatggttctaccatcaagtcttgccggagtaccag 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3393 attgtttttcaagattcgtaaaatcaatggttctaccatcaagtcttgccggagtaccag 3452 Query: 525 tctttaatctacccaacttaaatccagcagctttcaacgtatgacttattccataggtag 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3453 tctttaatctacccaacttaaatccagcagctttcaacgtatgacttattccataggtag 3512 Query: 585 gtgcttcaccaattcttccggcaggaatggttttcaaaccaatatgaatttctgcactta 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3513 gtgcttcaccaattcttccggcaggaatggttttcaaaccaatatgaatttctgcactta 3572 Query: 645 gaaatgtaccagttgaaatgacaactttggaacatttgataacctcatcattatctagaa 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3573 gaaatgtaccagttgaaatgacaactttggaacatttgataacctcatcattatctagaa 3632 Query: 705 ccacccctcgcacatcgccaaaatttctattatttacatcattggcaaaagacactttca 764 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3633 ccacccctcgcacatcgccaaaatttctattatttacatcattggcaaaagacactttca 3692 Query: 765 gtgtgtggtctattataacgtccttcactttgccggnagatagagntagggtttggataa 824 |||||||||||||||||||||||||||||||||||| |||||| || ||||||||||| Sbjct: 3693 gtgtgtggtctattataacgtccttcactttgccggagaatagagtta-ggtttggataa 3751 Query: 825 ttntgtagtgcgttttgcattnccttcaaatat-actctcggtcaatctgagcacgagga 883 || |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 3752 ttttgtagtgcgttttgcatttccttcaaatataactctcggtcaatctgagcacgagga 3811 Query: 884 cccc-aacagcagcacccctactttgattaaacatct 919 |||| |||||||||||||||||||||||| ||||||| Sbjct: 3812 ccccaaacagcagcacccctactttgatttaacatct 3848 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6589 Number of Sequences: 1807 Number of extensions: 6589 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 954 length of database: 10,358,551 effective HSP length: 16 effective length of query: 938 effective length of database: 10,329,639 effective search space: 9689201382 effective search space used: 9689201382 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)