BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZE04RM1.SCF screened BAC_end (945 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig378 1614 0.0 >3x_Contig378 Length = 1675 Score = 1614 bits (814), Expect = 0.0 Identities = 870/884 (98%), Gaps = 4/884 (0%) Strand = Plus / Minus Query: 50 ttcttcttcgagtcttggaatgtttcgtgcagtgtctgataattaggaaaagttccatca 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1600 ttcttcttcgagtcttggaatgtttcgtgcagtgtctgataattaggaaaagttccatca 1541 Query: 110 aacatatctacgatcctgcctcgaatattcttcgcagctgcaccactgatctgctgtgaa 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1540 aacatatctacgatcctgcctcgaatattcttcgcagctgcaccactgatctgctgtgaa 1481 Query: 170 atgatgctacctgccaatttattaaaataaaggtccatcgaatccttggccacattttcc 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1480 atgatgctacctgccaatttattaaaataaaggtccatcgaatccttggccacattttcc 1421 Query: 230 ttgagaaacatggtgaaaggactatgctcaatgatttcttttaatgtggggtcaatagtt 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 ttgagaaacatggtgaaaggactatgctcaatgatttcttttaatgtggggtcaatagtt 1361 Query: 290 aagatatgttctattccatcacggaatgaatcaatgtgctgatccagatattcttggtcc 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1360 aagatatgttctattccatcacggaatgaatcaatgtgctgatccagatattcttggtcc 1301 Query: 350 acatccaccttgaggatatcatcccttgtccttttcatttcaatatagccttggcgacac 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1300 acatccaccttgaggatatcatcccttgtccttttcatttcaatatagccttggcgacac 1241 Query: 410 ttttgtccgttctttctttctttactttcgagaagttgttttaaggttctctgacatata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1240 ttttgtccgttctttctttctttactttcgagaagttgttttaaggttctctgacatata 1181 Query: 470 agattcctttattaatcaagatcaactttaattatcaattatcactttattcaatggaaa 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1180 agattcctttattaatcaagatcaactttaattatcaattatcactttattcaatggaaa 1121 Query: 530 ataaacactaaaactgaaagttaccattactaggcaaccgtatcagagatgaacatcacc 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1120 ataaacactaaaactgaaagttaccattactaggcaaccgtatcagagatgaacatcacc 1061 Query: 590 gtcacttatgagcactctgatgatgtccttggaccttttgaattgagtgaagatatgtcg 649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1060 gtcacttatgagcactctgatgatgtccttggaccttttgaattgagtgaagatatgtcg 1001 Query: 650 cttatcgaccttttcgcattgatagactttaaagaggaatctcagatcatatttcacaac 709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1000 cttatcgaccttttcgcattgatagactttaaagaggaatctcagatcatatttcacaac 941 Query: 710 atgaagcaacttgacactaagaacacgaatantactttgaaagaagctggcttacaaaac 769 ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 940 atgaagcaacttgacactaagaacacgaatataactttgaaagaggctggcttacaaaac 881 Query: 770 catgatatgcttttgataaaacctaagaattccgctagttcccaggcagcttttcgttca 829 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| Sbjct: 880 catgatatgcttttgataaaacctaagaatcccgctagttcccaggcagc-tttcggtca 822 Query: 830 ccctca-gagatcgatttgacggatgaacagtacattgtacagttcagga-ctttcctat 887 ||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 821 acctcaggagatcgatttgacggatgaacagtacattgaacagttcaggagctttcctat 762 Query: 888 tagagaat-caagtatggctcagnagatgggtctttcaaactta 930 |||||||| ||||||||||||| ||||||||||| |||||||| Sbjct: 761 tagagaatccaagtatggctcaagagatgggtcttccaaactta 718 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7305 Number of Sequences: 1807 Number of extensions: 7305 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 945 length of database: 10,358,551 effective HSP length: 16 effective length of query: 929 effective length of database: 10,329,639 effective search space: 9596234631 effective search space used: 9596234631 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)