BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC20ZE06RM1.SCF screened BAC_end
         (974 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1698                                                        1637   0.0  

>3x_Contig1698 
          Length = 21001

 Score = 1637 bits (826), Expect = 0.0
 Identities = 896/915 (97%), Gaps = 5/915 (0%)
 Strand = Plus / Plus

                                                                         
Query: 46    aaccatccagttccgacctataattagatgcgaattcctagattccagaagggctgtcca 105
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 18413 aaccatccagttccgacctaaaattagatgcgaattcctagattccagaagggctgtcca 18472

                                                                         
Query: 106   tttatcttgagcccagacggcccatgctaatcgccttcgtagtccacgttcccagcgagg 165
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18473 tttatcttgagcccagacggcccatgctaatcgccttcgtagtccacgttcccagcgagg 18532

                                                                         
Query: 166   taatctccagtcttgacaatcaacaccgaggccaagttcctctgacaaagcatcaacttc 225
             |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 18533 taatctccagtcttgacaatcaacaccgaggccaagttcctctgacaaagcaacaacttc 18592

                                                                         
Query: 226   cgaacatagtacccaattgttgggacattcactacgacaatgcaaaattagtaaacctgc 285
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18593 cgaacatagtacccaattgttgggacattcactacgacaatgcaaaattagtaaacctgc 18652

                                                                         
Query: 286   ttggacaatgcttaatttgggtctttcaaacacctcgtagaaagtttttaatgcaatatc 345
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18653 ttggacaatgcttaatttgggtctttcaaacacctcgtagaaagtttttaatgcaatatc 18712

                                                                         
Query: 346   attcaattgattcgcaacatctggtttaggaaaaccaatcaattgcgggtggaaatccca 405
             ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 18713 attcaattgattcgcaacatctggtttaggaaaaccaatcaattgcgggtg-aaatccca 18771

                                                                         
Query: 406   ccattgtaaagctagggaataaatggatgcaagaattggcgccgtgagttcacgataaga 465
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18772 ccattgtaaagctagggaataaatggatgcaagaattggcgccgtgagttcacgataaga 18831

                                                                         
Query: 466   tcttgagtacttctccaaaaatactcgttcgtgtagaatgggaaagtaaggatgaatcag 525
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18832 tcttgagtacttctccaaaaatactcgttcgtgtagaatgggaaagtaaggatgaatcag 18891

                                                                         
Query: 526   tttaaagaaaatttcaaccaatattttaccatgaggatgcactagtttttccactaaatc 585
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18892 tttaaagaaaatttcaaccaatattttaccatgaggatgcactagtttttccactaaatc 18951

                                                                         
Query: 586   tatatcacgttcttgcttcaagtaaagttcttgattaaaatcgtctcttaagatgaactg 645
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18952 tatatcacgttcttgcttcaagtaaagttcttgattaaaatcgtctcttaagatgaactg 19011

                                                                         
Query: 646   tgcattgngagataccttgcgtagtgcgacattttttgataattgcacttgctcaatctt 705
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19012 tgcattgggagataccttgcgtagtgcgacattttttgataattgcacttgctcaatctt 19071

                                                                         
Query: 706   gtctagtttcatgtgattgattagaataatatcgaagatggatgtcgggcccacaaaata 765
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 19072 gtctagtttcatgtgattgattagattaatatcgaagatggatgtcgggcccacaaaata 19131

                                                                         
Query: 766   ngaagacctgngatattgaatggaaagactgagcat-antaatttgacgttgtatgctct 824
              ||||||||| |||||||||||| |||||||||||| | |||||||||||||||||||||
Sbjct: 19132 ggaagacctgggatattgaatgg-aagactgagcataattaatttgacgttgtatgctct 19190

                                                                         
Query: 825   gnntgaccag-agttagcggntgctgctgttgtggttgacctgagttcattccgttattg 883
             |  ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 19191 g-ttgaccagaagttagcggttgctgctgttgtggttgacctgagttcattccgtaattg 19249

                                                                         
Query: 884   aactgattgaaagcattaagtgacgagggggatgccntttgtgctgcaccgttgtttgac 943
             |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||  ||
Sbjct: 19250 aactgattgaaagcataaagtgacgagggggatgccttttgtgctgcaccgttgttgaac 19309

                            
Query: 944   tctgacgcattcctt 958
             |||||||||||||||
Sbjct: 19310 tctgacgcattcctt 19324


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5875
Number of Sequences: 1807
Number of extensions: 5875
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 974
length of database: 10,358,551
effective HSP length: 16
effective length of query: 958
effective length of database: 10,329,639
effective search space: 9895794162
effective search space used: 9895794162
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)