BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC20ZF04FM1.SCF screened BAC_end
         (945 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1600                                                        1586   0.0  

>3x_Contig1600 
          Length = 9359

 Score = 1586 bits (800), Expect = 0.0
 Identities = 850/862 (98%), Gaps = 4/862 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   gcaaaaggatcccacttcagttcatgtctcttgggatgcttatttcaagaacatgggtaa 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5831 gcaaaaggatcccacttcagttcatgtctcttgggatgcttatttcaagaacatgggtaa 5890

                                                                        
Query: 148  tctgaatattccagcctcttctgccttcaccgccccaccaacattaattccaataccaac 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5891 tctgaatattccagcctcttctgccttcaccgccccaccaacattaattccaataccaac 5950

                                                                        
Query: 208  gggtcctggtgtgcctcaagatatattgatagggggttcgttaagtggcgttgaccaaga 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5951 gggtcctggtgtgcctcaagatatattgatagggggttcgttaagtggcgttgaccaaga 6010

                                                                        
Query: 268  catcacaacacatttaaaagtgcaacttttgtgccgtgcttaccaagtaagaggtcacca 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6011 catcacaacacatttaaaagtgcaacttttgtgccgtgcttaccaagtaagaggtcacca 6070

                                                                        
Query: 328  gaaggctcatattgatccgttacaaatttcatttggtgatgataagagtaaacctctacc 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6071 gaaggctcatattgatccgttacaaatttcatttggtgatgataagagtaaacctctacc 6130

                                                                        
Query: 388  tcgtgagttgactttggaacactatggattcacagaaaaggatctagatagagatatcac 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6131 tcgtgagttgactttggaacactatggattcacagaaaaggatctagatagagatatcac 6190

                                                                        
Query: 448  attgggacccggtatcttgccacgtttctctcgtgatggtagaaagaccatgaaactaag 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6191 attgggacccggtatcttgccacgtttctctcgtgatggtagaaagaccatgaaactaag 6250

                                                                        
Query: 508  agaaattattgctgctttggaaaaattgtactgttctggatacggtatcgaatacattca 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6251 agaaattattgctgctttggaaaaattgtactgttctggatacggtatcgaatacattca 6310

                                                                        
Query: 568  tatcccttcaaaagaacaatgtgaatggttaagagaaagaattgaaatcccacaacctta 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6311 tatcccttcaaaagaacaatgtgaatggttaagagaaagaattgaaatcccacaacctta 6370

                                                                        
Query: 628  taattataccgtagaccaaaagagacaaattttggatagactgacttgggctacttcttt 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6371 taattataccgtagaccaaaagagacaaattttggatagactgacttgggctacttcttt 6430

                                                                        
Query: 688  tgaaactttcttatctactaaattccctaacgataagagattcggtttggaaggtttaga 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6431 tgaaactttcttatctactaaattccctaacgataagagattcggtttggaaggtttaga 6490

                                                                        
Query: 748  aggtgttgttcctggtatcaagaccttgattgaccgttccgttgaaatangtgttgaaga 807
            |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 6491 aggtgttgttcctggtatcaagaccttgattgaccgttccgttgaattaggtgttgaaga 6550

                                                                        
Query: 808  atgtgtcttgggtatggctcatcgtggtagattaaacgttttgtctaatgtggtgcgtaa 867
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6551 tgttgtcttgggtatggctcatcgtggtagattaaacgttttgtctaatgtggtgcgtaa 6610

                                                                        
Query: 868  accaaa-gaatccatcttctcagaattt-agggntctgttgctccagaag-atacgaggt 924
            |||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||| 
Sbjct: 6611 accaaacgaatccatcttctcagaatttaagggttctgttgctccagaagaatacgaggg 6670

                                  
Query: 925  ttcc-gtgatgtgaattatcat 945
            |||| |||||||||| ||||||
Sbjct: 6671 ttccggtgatgtgaaatatcat 6692


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6625
Number of Sequences: 1807
Number of extensions: 6625
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)