BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZF04FM1.SCF screened BAC_end (945 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1600 1586 0.0 >3x_Contig1600 Length = 9359 Score = 1586 bits (800), Expect = 0.0 Identities = 850/862 (98%), Gaps = 4/862 (0%) Strand = Plus / Plus Query: 88 gcaaaaggatcccacttcagttcatgtctcttgggatgcttatttcaagaacatgggtaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5831 gcaaaaggatcccacttcagttcatgtctcttgggatgcttatttcaagaacatgggtaa 5890 Query: 148 tctgaatattccagcctcttctgccttcaccgccccaccaacattaattccaataccaac 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5891 tctgaatattccagcctcttctgccttcaccgccccaccaacattaattccaataccaac 5950 Query: 208 gggtcctggtgtgcctcaagatatattgatagggggttcgttaagtggcgttgaccaaga 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5951 gggtcctggtgtgcctcaagatatattgatagggggttcgttaagtggcgttgaccaaga 6010 Query: 268 catcacaacacatttaaaagtgcaacttttgtgccgtgcttaccaagtaagaggtcacca 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6011 catcacaacacatttaaaagtgcaacttttgtgccgtgcttaccaagtaagaggtcacca 6070 Query: 328 gaaggctcatattgatccgttacaaatttcatttggtgatgataagagtaaacctctacc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6071 gaaggctcatattgatccgttacaaatttcatttggtgatgataagagtaaacctctacc 6130 Query: 388 tcgtgagttgactttggaacactatggattcacagaaaaggatctagatagagatatcac 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6131 tcgtgagttgactttggaacactatggattcacagaaaaggatctagatagagatatcac 6190 Query: 448 attgggacccggtatcttgccacgtttctctcgtgatggtagaaagaccatgaaactaag 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6191 attgggacccggtatcttgccacgtttctctcgtgatggtagaaagaccatgaaactaag 6250 Query: 508 agaaattattgctgctttggaaaaattgtactgttctggatacggtatcgaatacattca 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6251 agaaattattgctgctttggaaaaattgtactgttctggatacggtatcgaatacattca 6310 Query: 568 tatcccttcaaaagaacaatgtgaatggttaagagaaagaattgaaatcccacaacctta 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6311 tatcccttcaaaagaacaatgtgaatggttaagagaaagaattgaaatcccacaacctta 6370 Query: 628 taattataccgtagaccaaaagagacaaattttggatagactgacttgggctacttcttt 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6371 taattataccgtagaccaaaagagacaaattttggatagactgacttgggctacttcttt 6430 Query: 688 tgaaactttcttatctactaaattccctaacgataagagattcggtttggaaggtttaga 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6431 tgaaactttcttatctactaaattccctaacgataagagattcggtttggaaggtttaga 6490 Query: 748 aggtgttgttcctggtatcaagaccttgattgaccgttccgttgaaatangtgttgaaga 807 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 6491 aggtgttgttcctggtatcaagaccttgattgaccgttccgttgaattaggtgttgaaga 6550 Query: 808 atgtgtcttgggtatggctcatcgtggtagattaaacgttttgtctaatgtggtgcgtaa 867 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6551 tgttgtcttgggtatggctcatcgtggtagattaaacgttttgtctaatgtggtgcgtaa 6610 Query: 868 accaaa-gaatccatcttctcagaattt-agggntctgttgctccagaag-atacgaggt 924 |||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||| Sbjct: 6611 accaaacgaatccatcttctcagaatttaagggttctgttgctccagaagaatacgaggg 6670 Query: 925 ttcc-gtgatgtgaattatcat 945 |||| |||||||||| |||||| Sbjct: 6671 ttccggtgatgtgaaatatcat 6692 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6625 Number of Sequences: 1807 Number of extensions: 6625 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 945 length of database: 10,358,551 effective HSP length: 16 effective length of query: 929 effective length of database: 10,329,639 effective search space: 9596234631 effective search space used: 9596234631 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)