BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC20ZF11RM1.SCF screened BAC_end
         (957 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1663                                                        1675   0.0  
3x_Contig1557                                                         155   2e-37
3x_Contig1518                                                         153   8e-37
3x_Contig1428                                                         151   3e-36
3x_Contig1446                                                         149   1e-35
3x_Contig1374                                                         149   1e-35
3x_Contig1521                                                         145   2e-34
3x_Contig1741                                                         113   7e-25
3x_Contig1272                                                         111   3e-24

>3x_Contig1663 
          Length = 13533

 Score = 1675 bits (845), Expect = 0.0
 Identities = 888/904 (98%)
 Strand = Plus / Plus

                                                                        
Query: 49   tattttttacttgacattgtatattcagtattcaaagttcacgttctgttgtaactttta 108
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 573  tattttttacttgacattgcatattcagtattcaaagttcacgttctgttgtaactttta 632

                                                                        
Query: 109  aaaagtcgccatgacaaaaaaacccacgcactttccatacacagacttttgataaacatt 168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633  aaaagtcgccatgacaaaaaaacccacgcactttccatacacagacttttgataaacatt 692

                                                                        
Query: 169  tcataagtctttttatggagaataaaaggagtaattgctaaacagttgaatcatgtgctc 228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693  tcataagtctttttatggagaataaaaggagtaattgctaaacagttgaatcatgtgctc 752

                                                                        
Query: 229  cacatagaattcaatccaaaccgatgatacagttcagtattacattagtatgaccatgtc 288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753  cacatagaattcaatccaaaccgatgatacagttcagtattacattagtatgaccatgtc 812

                                                                        
Query: 289  acgggaacataaagtttgaaaaaacaactttttcatcaatatcatccgatatagtgtaac 348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813  acgggaacataaagtttgaaaaaacaactttttcatcaatatcatccgatatagtgtaac 872

                                                                        
Query: 349  ggctatcacatcacgctttcaccgtggagaccggggttcgactccccgtatcggagtatt 408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873  ggctatcacatcacgctttcaccgtggagaccggggttcgactccccgtatcggagtatt 932

                                                                        
Query: 409  attttttgtattttcttattacccagtggaaagttaatgttcgactgtgaatataattgc 468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933  attttttgtattttcttattacccagtggaaagttaatgttcgactgtgaatataattgc 992

                                                                        
Query: 469  aattcgacatcaacgtcgaaaatgcatacattcttttgattaatacttacggaagctaaa 528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993  aattcgacatcaacgtcgaaaatgcatacattcttttgattaatacttacggaagctaaa 1052

                                                                        
Query: 529  tacagattggaatattttttagctcttaaataccaaaattaccacttcttatgtcttcgt 588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 tacagattggaatattttttagctcttaaataccaaaattaccacttcttatgtcttcgt 1112

                                                                        
Query: 589  ataacttcttcctattcgtttgtttatccatattgccactatgtagcttatttgtcaccg 648
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 ataacttcttcctattcgtttgtttatccatattgccactatgtagcttatttgtcaccg 1172

                                                                        
Query: 649  gtccttgaggtataaatcctggctggggtggaactggggactgatgctgattgtacctac 708
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 gtccttgaggtataaatcctggctggggtggaactggggactgatgctgattgtacctac 1232

                                                                        
Query: 709  cgccgttgacagggggacgaaattgttgcggctgcataggcggtggtggtgaagagtaag 768
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 cgccgttgacagggggacgaaattgttgcggctgcataggcggtggtggtgaagagtaag 1292

                                                                        
Query: 769  tctgtggtggtggaactgccgaacttgnggcatatcgnttgagtccatatcccacaccat 828
            ||||||||||||||||||||||||||| ||||||||| |   ||||||||||||||||||
Sbjct: 1293 tctgtggtggtggaactgccgaacttggggcatatcgttgaggtccatatcccacaccat 1352

                                                                        
Query: 829  actngagattaacagtaccttgtnacataccatttagcggtccccgtacaggaaccttgc 888
            |||   ||||||||||||||||| ||||||||||  ||||||||||||||||||||||||
Sbjct: 1353 actgaggattaacagtaccttgtaacataccattaggcggtccccgtacaggaaccttgc 1412

                                                                        
Query: 889  cttgtggcatatgttgatgcataccataaaatgtaccttgnggaatatgtgcattgggtc 948
            ||||||||||||||||||||||||||||  |||||||||| |||||||||||||| ||||
Sbjct: 1413 cttgtggcatatgttgatgcataccataggatgtaccttgaggaatatgtgcatttggtc 1472

                
Query: 949  ccgg 952
            ||||
Sbjct: 1473 ccgg 1476


>3x_Contig1557 
          Length = 10562

 Score =  155 bits (78), Expect = 2e-37
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                        
Query: 332  atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2541 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 2600

                                  
Query: 392  ccccgtatcggagtattatttt 413
            ||||||||||||||||| ||||
Sbjct: 2601 ccccgtatcggagtattttttt 2622


>3x_Contig1518 
          Length = 11021

 Score =  153 bits (77), Expect = 8e-37
 Identities = 77/77 (100%)
 Strand = Plus / Minus

                                                                        
Query: 332  atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5818 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 5759

                             
Query: 392  ccccgtatcggagtatt 408
            |||||||||||||||||
Sbjct: 5758 ccccgtatcggagtatt 5742


>3x_Contig1428 
          Length = 9146

 Score =  151 bits (76), Expect = 3e-36
 Identities = 76/76 (100%)
 Strand = Plus / Minus

                                                                        
Query: 332  atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6455 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 6396

                            
Query: 392  ccccgtatcggagtat 407
            ||||||||||||||||
Sbjct: 6395 ccccgtatcggagtat 6380


>3x_Contig1446 
          Length = 10598

 Score =  149 bits (75), Expect = 1e-35
 Identities = 81/83 (97%)
 Strand = Plus / Minus

                                                                        
Query: 332  atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3305 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 3246

                                   
Query: 392  ccccgtatcggagtattattttt 414
            |||||||||||||| || |||||
Sbjct: 3245 ccccgtatcggagtgtttttttt 3223


>3x_Contig1374 
          Length = 8985

 Score =  149 bits (75), Expect = 1e-35
 Identities = 81/83 (97%)
 Strand = Plus / Minus

                                                                        
Query: 332  atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8891 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 8832

                                   
Query: 392  ccccgtatcggagtattattttt 414
            |||||||||||||| || |||||
Sbjct: 8831 ccccgtatcggagttttcttttt 8809


>3x_Contig1521 
          Length = 8057

 Score =  145 bits (73), Expect = 2e-34
 Identities = 73/73 (100%)
 Strand = Plus / Minus

                                                                        
Query: 333  tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4296 tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 4237

                         
Query: 393  cccgtatcggagt 405
            |||||||||||||
Sbjct: 4236 cccgtatcggagt 4224


>3x_Contig1741 
          Length = 21706

 Score =  113 bits (57), Expect = 7e-25
 Identities = 69/73 (94%)
 Strand = Plus / Minus

                                                                        
Query: 332  atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 391
            ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 9345 atccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgact 9286

                         
Query: 392  ccccgtatcggag 404
            ||| |||||||||
Sbjct: 9285 cccggtatcggag 9273


>3x_Contig1272 
          Length = 8315

 Score =  111 bits (56), Expect = 3e-24
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                        
Query: 333  tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 392
            |||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||
Sbjct: 5215 tccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgactc 5156

                        
Query: 393  cccgtatcggag 404
            || |||||||||
Sbjct: 5155 ccggtatcggag 5144


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5977
Number of Sequences: 1807
Number of extensions: 5977
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 9
length of query: 957
length of database: 10,358,551
effective HSP length: 16
effective length of query: 941
effective length of database: 10,329,639
effective search space: 9720190299
effective search space used: 9720190299
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)