BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC20ZH09FM1.SCF screened BAC_end
         (977 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig967                                                         1455   0.0  

>3x_Contig967 
          Length = 3110

 Score = 1455 bits (734), Expect = 0.0
 Identities = 775/785 (98%), Gaps = 3/785 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   ctgaaatctttcgcaggtcgaaaagatttgtcctgtcaagtatgttattctcctttctag 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2714 ctgaaatctttcgcaggtcgaaaagatttgtcctgtcaagtatgttattctcctttctag 2655

                                                                        
Query: 146  gagatctttcatattttggtagaggtgatgggtttggcgatttctcaggtataggactaa 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2654 gagatctttcatattttggtagaggtgatgggtttggcgatttctcaggtataggactaa 2595

                                                                        
Query: 206  acccgctacccaataggtcgcttgaaaatgaactttggctcctcaaatgcattatatcat 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2594 acccgctacccaataggtcgcttgaaaatgaactttggctcctcaaatgcattatatcat 2535

                                                                        
Query: 266  cgtgtgaatggattctggcaagtctatttcttttctttttgagggattggctcctactca 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2534 cgtgtgaatggattctggcaagtctatttcttttctttttgagggattggctcctactca 2475

                                                                        
Query: 326  gagaggaatgttttgttatgtcataatcttcaacgtcttctgcttcctcaagcgaaagtc 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2474 gagaggaatgttttgttatgtcataatcttcaacgtcttctgcttcctcaagcgaaagtc 2415

                                                                        
Query: 386  tcggtgttctatccgcagacgtttgtgacgataaaatacttccttgctgggaatttggat 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2414 tcggtgttctatccgcagacgtttgtgacgataaaatacttccttgctgggaatttggat 2355

                                                                        
Query: 446  gtatacgaacgatttcagtatccggcgtgtcttggttagtatcggacatagatgacattg 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2354 gtatacgaacgatttcagtatccggcgtgtcttggttagtatcggacatagatgacattg 2295

                                                                        
Query: 506  aagtcctattcaaaagaataacagattctgaagtatcatcattatcaccccattcatgct 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2294 aagtcctattcaaaagaataacagattctgaagtatcatcattatcaccccattcatgct 2235

                                                                        
Query: 566  ttcgggtacccttgatggctggtatgttattggtgttggaaagtaaaggagcgaatgttt 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2234 ttcgggtacccttgatggctggtatgttattggtgttggaaagtaaaggagcgaatgttt 2175

                                                                        
Query: 626  ctgcatcagaccggcttagcagtggtgacgtattcgatgaactggtctttccattgnagc 685
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2174 ctgcatcagaccggcttagcagtggtgacgtattcgatgaactggtctttccattggagc 2115

                                                                        
Query: 686  ttttcttaaacaacttagaactgaaaattttgttactagtaagtttatgaagcggctcga 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2114 ttttcttaaacaacttagaactgaaaattttgttactagtaagtttatgaagcggctcga 2055

                                                                        
Query: 746  tacttgaagaatgctttaaaacattggtaggtgggtacccctgatggataagatagctca 805
             ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 2054 aacttgaagattgctttaaaacattgttaggtgggta-ccctgatggataagatagctca 1996

                                                                        
Query: 806  gtctcaacagaaccttgtgagtttctcctgtttttcgggactttcgttggaaagattttt 865
            ||| ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||| 
Sbjct: 1995 gtcccaaaagaaccttgtgagtttctcctg-ttttcgggactttcgttgg-aagattttc 1938

                 
Query: 866  tgggg 870
            |||||
Sbjct: 1937 tgggg 1933


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6824
Number of Sequences: 1807
Number of extensions: 6824
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 977
length of database: 10,358,551
effective HSP length: 16
effective length of query: 961
effective length of database: 10,329,639
effective search space: 9926783079
effective search space used: 9926783079
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)