BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC20ZH09FM1.SCF screened BAC_end (977 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig967 1455 0.0 >3x_Contig967 Length = 3110 Score = 1455 bits (734), Expect = 0.0 Identities = 775/785 (98%), Gaps = 3/785 (0%) Strand = Plus / Minus Query: 86 ctgaaatctttcgcaggtcgaaaagatttgtcctgtcaagtatgttattctcctttctag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2714 ctgaaatctttcgcaggtcgaaaagatttgtcctgtcaagtatgttattctcctttctag 2655 Query: 146 gagatctttcatattttggtagaggtgatgggtttggcgatttctcaggtataggactaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2654 gagatctttcatattttggtagaggtgatgggtttggcgatttctcaggtataggactaa 2595 Query: 206 acccgctacccaataggtcgcttgaaaatgaactttggctcctcaaatgcattatatcat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2594 acccgctacccaataggtcgcttgaaaatgaactttggctcctcaaatgcattatatcat 2535 Query: 266 cgtgtgaatggattctggcaagtctatttcttttctttttgagggattggctcctactca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2534 cgtgtgaatggattctggcaagtctatttcttttctttttgagggattggctcctactca 2475 Query: 326 gagaggaatgttttgttatgtcataatcttcaacgtcttctgcttcctcaagcgaaagtc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2474 gagaggaatgttttgttatgtcataatcttcaacgtcttctgcttcctcaagcgaaagtc 2415 Query: 386 tcggtgttctatccgcagacgtttgtgacgataaaatacttccttgctgggaatttggat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2414 tcggtgttctatccgcagacgtttgtgacgataaaatacttccttgctgggaatttggat 2355 Query: 446 gtatacgaacgatttcagtatccggcgtgtcttggttagtatcggacatagatgacattg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2354 gtatacgaacgatttcagtatccggcgtgtcttggttagtatcggacatagatgacattg 2295 Query: 506 aagtcctattcaaaagaataacagattctgaagtatcatcattatcaccccattcatgct 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2294 aagtcctattcaaaagaataacagattctgaagtatcatcattatcaccccattcatgct 2235 Query: 566 ttcgggtacccttgatggctggtatgttattggtgttggaaagtaaaggagcgaatgttt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2234 ttcgggtacccttgatggctggtatgttattggtgttggaaagtaaaggagcgaatgttt 2175 Query: 626 ctgcatcagaccggcttagcagtggtgacgtattcgatgaactggtctttccattgnagc 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2174 ctgcatcagaccggcttagcagtggtgacgtattcgatgaactggtctttccattggagc 2115 Query: 686 ttttcttaaacaacttagaactgaaaattttgttactagtaagtttatgaagcggctcga 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2114 ttttcttaaacaacttagaactgaaaattttgttactagtaagtttatgaagcggctcga 2055 Query: 746 tacttgaagaatgctttaaaacattggtaggtgggtacccctgatggataagatagctca 805 ||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 2054 aacttgaagattgctttaaaacattgttaggtgggta-ccctgatggataagatagctca 1996 Query: 806 gtctcaacagaaccttgtgagtttctcctgtttttcgggactttcgttggaaagattttt 865 ||| ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1995 gtcccaaaagaaccttgtgagtttctcctg-ttttcgggactttcgttgg-aagattttc 1938 Query: 866 tgggg 870 ||||| Sbjct: 1937 tgggg 1933 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6824 Number of Sequences: 1807 Number of extensions: 6824 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 977 length of database: 10,358,551 effective HSP length: 16 effective length of query: 961 effective length of database: 10,329,639 effective search space: 9926783079 effective search space used: 9926783079 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)