BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZA03FM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1114 1544 0.0 >3x_Contig1114 Length = 6488 Score = 1544 bits (779), Expect = 0.0 Identities = 849/863 (98%), Gaps = 8/863 (0%) Strand = Plus / Plus Query: 89 tttattctccttcataacctgttctgatttggcttcataatctctcgactttttctgttc 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4589 tttattctccttcataacctgttctgatttggcttcataatctctcgactttttctgttc 4648 Query: 149 gtatacagataattctcttctaaattgagcaaactgctgtgctacctcattcttgatcac 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4649 gtatacagataattctcttctaaattgagcaaactgctgtgctacctcattcttgatcac 4708 Query: 209 cttatcagtttgtttagacgttatggatcttatgacgttattttctaacttactggtgat 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4709 cttatcagtttgtttagacgttatggatcttatgacgttattttctaacttactggtgat 4768 Query: 269 agacgataatagagggtcagttagaaacagactattgccattgtgataaaaacttccatc 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4769 agacgataatagagggtcagttagaaacagactattgccattgtgataaaaacttccatc 4828 Query: 329 catcataaaacgacttaaactggaattgctaccgatctcagaactttcagaagtagattg 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4829 catcataaaacgacttaaactggaattgctaccgatctcagaactttcagaagtagattg 4888 Query: 389 agcttcttgcaacattcctagttcttttactcttgcatcgatgtcttcccgcagtaaaac 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4889 agcttcttgcaacattcctagttcttttactcttgcatcgatgtcttcccgcagtaaaac 4948 Query: 449 tatggcattatgtatgttttcaggtaaactctccatggaatttatagcatcaagttgttt 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4949 tatggcattatgtatgttttcaggtaaactctccatggaatttatagcatcaagttgttt 5008 Query: 509 agatgcattttcgaaaagctcaatggctctactaagtttattcctcttgatataggattc 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5009 agatgcattttcgaaaagctcaatggctctactaagtttattcctcttgatataggattc 5068 Query: 569 tgcatcatctatcgtctcgtaaacctataatattaagaagtaacgtcataaatatcagtt 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5069 tgcatcatctatcgtctcgtaaacctataatattaagaagtaacgtcataaatatcagtt 5128 Query: 629 agtcatttgattaattcgagggttttgagtgcaaaagagaatcatacgttattaagctcg 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5129 agtcatttgattaattcgagggttttgagtgcaaaagagaatcatacgttattaagctcg 5188 Query: 689 gtggtcatctttatagtcccatttcttaagaataattatcgttggaaagaagtgattnta 748 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5189 gtggtcatctttatagtcccatttcttaagaataattatcgttggaaagaagtgatttta 5248 Query: 749 aaataatcttcaaaggtttggctgtacatgaagcgtgccttaacgtnaggcattcctnc- 807 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 5249 aaataatcttcaaaggtttggctgtacatgaagcgtgccttaacgtagggcattcctcca 5308 Query: 808 aaatactgtctgtcacatttgctctcttg-aaacatgtcaag-agat-cttnattgcgtt 864 ||||||||||||||||||||||||||||| |||||||||||| |||| ||| |||||||| Sbjct: 5309 aaatactgtctgtcacatttgctctcttgaaaacatgtcaagaagatccttaattgcgtt 5368 Query: 865 agaac-aaaaacagattat-aagttgcgaactg-aattagaccctgtttttgagaaattt 921 ||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 5369 agaacaaaaaacagattataaagttgcgaactgaaattagaccctgtttttgagaaattt 5428 Query: 922 t-ataaaaacagtttaacaaaca 943 | |||||||||| |||||||||| Sbjct: 5429 taataaaaacaggttaacaaaca 5451 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6289 Number of Sequences: 1807 Number of extensions: 6289 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)