BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZA03FM1.SCF screened BAC_end
         (951 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1114                                                        1544   0.0  

>3x_Contig1114 
          Length = 6488

 Score = 1544 bits (779), Expect = 0.0
 Identities = 849/863 (98%), Gaps = 8/863 (0%)
 Strand = Plus / Plus

                                                                        
Query: 89   tttattctccttcataacctgttctgatttggcttcataatctctcgactttttctgttc 148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4589 tttattctccttcataacctgttctgatttggcttcataatctctcgactttttctgttc 4648

                                                                        
Query: 149  gtatacagataattctcttctaaattgagcaaactgctgtgctacctcattcttgatcac 208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4649 gtatacagataattctcttctaaattgagcaaactgctgtgctacctcattcttgatcac 4708

                                                                        
Query: 209  cttatcagtttgtttagacgttatggatcttatgacgttattttctaacttactggtgat 268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4709 cttatcagtttgtttagacgttatggatcttatgacgttattttctaacttactggtgat 4768

                                                                        
Query: 269  agacgataatagagggtcagttagaaacagactattgccattgtgataaaaacttccatc 328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4769 agacgataatagagggtcagttagaaacagactattgccattgtgataaaaacttccatc 4828

                                                                        
Query: 329  catcataaaacgacttaaactggaattgctaccgatctcagaactttcagaagtagattg 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4829 catcataaaacgacttaaactggaattgctaccgatctcagaactttcagaagtagattg 4888

                                                                        
Query: 389  agcttcttgcaacattcctagttcttttactcttgcatcgatgtcttcccgcagtaaaac 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4889 agcttcttgcaacattcctagttcttttactcttgcatcgatgtcttcccgcagtaaaac 4948

                                                                        
Query: 449  tatggcattatgtatgttttcaggtaaactctccatggaatttatagcatcaagttgttt 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4949 tatggcattatgtatgttttcaggtaaactctccatggaatttatagcatcaagttgttt 5008

                                                                        
Query: 509  agatgcattttcgaaaagctcaatggctctactaagtttattcctcttgatataggattc 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5009 agatgcattttcgaaaagctcaatggctctactaagtttattcctcttgatataggattc 5068

                                                                        
Query: 569  tgcatcatctatcgtctcgtaaacctataatattaagaagtaacgtcataaatatcagtt 628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5069 tgcatcatctatcgtctcgtaaacctataatattaagaagtaacgtcataaatatcagtt 5128

                                                                        
Query: 629  agtcatttgattaattcgagggttttgagtgcaaaagagaatcatacgttattaagctcg 688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5129 agtcatttgattaattcgagggttttgagtgcaaaagagaatcatacgttattaagctcg 5188

                                                                        
Query: 689  gtggtcatctttatagtcccatttcttaagaataattatcgttggaaagaagtgattnta 748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5189 gtggtcatctttatagtcccatttcttaagaataattatcgttggaaagaagtgatttta 5248

                                                                        
Query: 749  aaataatcttcaaaggtttggctgtacatgaagcgtgccttaacgtnaggcattcctnc- 807
            ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| | 
Sbjct: 5249 aaataatcttcaaaggtttggctgtacatgaagcgtgccttaacgtagggcattcctcca 5308

                                                                        
Query: 808  aaatactgtctgtcacatttgctctcttg-aaacatgtcaag-agat-cttnattgcgtt 864
            ||||||||||||||||||||||||||||| |||||||||||| |||| ||| ||||||||
Sbjct: 5309 aaatactgtctgtcacatttgctctcttgaaaacatgtcaagaagatccttaattgcgtt 5368

                                                                        
Query: 865  agaac-aaaaacagattat-aagttgcgaactg-aattagaccctgtttttgagaaattt 921
            ||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5369 agaacaaaaaacagattataaagttgcgaactgaaattagaccctgtttttgagaaattt 5428

                                   
Query: 922  t-ataaaaacagtttaacaaaca 943
            | |||||||||| ||||||||||
Sbjct: 5429 taataaaaacaggttaacaaaca 5451


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6289
Number of Sequences: 1807
Number of extensions: 6289
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)