BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZA07FM1.SCF screened BAC_end
         (962 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1589                                                        1546   0.0  

>3x_Contig1589 
          Length = 10239

 Score = 1546 bits (780), Expect = 0.0
 Identities = 834/846 (98%), Gaps = 6/846 (0%)
 Strand = Plus / Minus

                                                                        
Query: 90   tagctgagaagaatgcacatgctagcaacgcaatgcagctatttaaccgtaatgaagaaa 149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8282 tagctgagaagaatgcacatgctagcaacgcaatgcagctatttaaccgtaatgaagaaa 8223

                                                                        
Query: 150  ttctaactcaattgaaaaactgtgaaatgcacatatgtcagttgacatcattgaccaaag 209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8222 ttctaactcaattgaaaaactgtgaaatgcacatatgtcagttgacatcattgaccaaag 8163

                                                                        
Query: 210  aatacgaaactgagataataaacattcaaagagatatggaagaattcaataaagacaagg 269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8162 aatacgaaactgagataataaacattcaaagagatatggaagaattcaataaagacaagg 8103

                                                                        
Query: 270  gttcaaagctcaggcagttagaagctaatctctctgaagtctctgcagaagtggaaaaat 329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8102 gttcaaagctcaggcagttagaagctaatctctctgaagtctctgcagaagtggaaaaat 8043

                                                                        
Query: 330  tagacactgatacggctaagctgtttgatgaatatcagaacttgagttttgacacagaac 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8042 tagacactgatacggctaagctgtttgatgaatatcagaacttgagttttgacacagaac 7983

                                                                        
Query: 390  agctacacacagatatttctaacgcccaaaatgaagtatcaattgcagagaaaaggcttg 449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7982 agctacacacagatatttctaacgcccaaaatgaagtatcaattgcagagaaaaggcttg 7923

                                                                        
Query: 450  cagaactggaaacaacgtgtaatgagtacgagggcgttgtgaggaccaaaaagtctgaac 509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7922 cagaactggaaacaacgtgtaatgagtacgagggcgttgtgaggaccaaaaagtctgaac 7863

                                                                        
Query: 510  ttcacgaagtacacagtattttacaagaggaaatgtccagactttcaggaatggaagatg 569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7862 ttcacgaagtacacagtattttacaagaggaaatgtccagactttcaggaatggaagatg 7803

                                                                        
Query: 570  agatatcagaactagagttattgcttaaaaataagaaccatctactttcaacttcggaag 629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7802 agatatcagaactagagttattgcttaaaaataagaaccatctactttcaacttcggaag 7743

                                                                        
Query: 630  tggatttacagaagattacaaacgacttgcataaatacaagaataacacttttggcatcg 689
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7742 tggatttacagaagattacaaacgacttgcataaatacaagaataacacttttggcatcg 7683

                                                                        
Query: 690  atcaagccattgaaaatttaatcaacgaaaatgattggttggaagatacttccatggtca 749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7682 atcaagccattgaaaatttaatcaacgaaaatgattggttggaagatacttccatggtca 7623

                                                                        
Query: 750  atagcatcttgacacagaataagaacattaatctagatcagtacaagaaacgtggttccg 809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7622 atagcatcttgacacagaataagaacattaatctagatcagtacaagaaacgtggttccg 7563

                                                                        
Query: 810  atttagcccgaagctttcagagcttaag-agggaggtgaacccagaggt-atgagtatga 867
            ||||||||  |||||||||||||||||| ||| |||||||||||||||| ||||||||||
Sbjct: 7562 atttagccgaaagctttcagagcttaagaaggaaggtgaacccagaggtaatgagtatga 7503

                                                                        
Query: 868  ttgagagtgtanagaaaagggaa--cgcattgaaaac-atgatt-aaaccattgaaaaag 923
            ||||||||||| |||||| ||||   ||||||||||| |||||| |||||||||||||||
Sbjct: 7502 ttgagagtgtagagaaaaaggaaacggcattgaaaacaatgattaaaaccattgaaaaag 7443

                  
Query: 924  ataagc 929
            ||||||
Sbjct: 7442 ataagc 7437


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6973
Number of Sequences: 1807
Number of extensions: 6973
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 962
length of database: 10,358,551
effective HSP length: 16
effective length of query: 946
effective length of database: 10,329,639
effective search space: 9771838494
effective search space used: 9771838494
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)