BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZA08FM1.SCF screened BAC_end
         (963 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1589                                                        1265   0.0  

>3x_Contig1589 
          Length = 10239

 Score = 1265 bits (638), Expect = 0.0
 Identities = 734/762 (96%), Gaps = 3/762 (0%)
 Strand = Plus / Minus

                                                                        
Query: 94   ctgataagaatgcacatgctagcaacgcaatgcagctatttaaccgtaatgaagaaattc 153
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8279 ctgagaagaatgcacatgctagcaacgcaatgcagctatttaaccgtaatgaagaaattc 8220

                                                                        
Query: 154  taactcaattgaaaaactttgtaaatgcacatatgtcagttgacatcattgaccaaagaa 213
            |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 8219 taactcaattgaaaaactgtg-aaatgcacatatgtcagttgacatcattgaccaaagaa 8161

                                                                        
Query: 214  ttttaaattgttataataaacattcaaagagatatggaagaattcaataaagacaagggt 273
            |   ||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8160 tacgaaactgagataataaacattcaaagagatatggaagaattcaataaagacaagggt 8101

                                                                        
Query: 274  tcaaagctcaggcagttagaagctaatctctctgaagtctctgcagaagtggaaaaatta 333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8100 tcaaagctcaggcagttagaagctaatctctctgaagtctctgcagaagtggaaaaatta 8041

                                                                        
Query: 334  gacactgatacggctaagctgtttgatgaatatcagaacttgagttttgacacagaacag 393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8040 gacactgatacggctaagctgtttgatgaatatcagaacttgagttttgacacagaacag 7981

                                                                        
Query: 394  ctacacacagatatttctaacgcccaaaatgaagtatcaattgcagagaaaaggcttgca 453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7980 ctacacacagatatttctaacgcccaaaatgaagtatcaattgcagagaaaaggcttgca 7921

                                                                        
Query: 454  gaactggaaacaacgtgtaatgagtacgagggcgttgtgaggaccaaaaagtctgaactt 513
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7920 gaactggaaacaacgtgtaatgagtacgagggcgttgtgaggaccaaaaagtctgaactt 7861

                                                                        
Query: 514  cacgaagtacacagtattttacaagaggaaatgtccagactttcaggaatggaagatgag 573
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7860 cacgaagtacacagtattttacaagaggaaatgtccagactttcaggaatggaagatgag 7801

                                                                        
Query: 574  atatcagaactagagttattgctttaaaaaaagaaccatctacttgcaactttggaagtg 633
            |||||||||||||||||||||||| |||| ||||||||||||||| |||||| |||||||
Sbjct: 7800 atatcagaactagagttattgcttaaaaataagaaccatctactttcaacttcggaagtg 7741

                                                                        
Query: 634  gatttacagaagattacaaacgacttgcattaatacaagaataacacttttggcattgat 693
            |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 7740 gatttacagaagattacaaacgacttgcataaatacaagaataacacttttggcatcgat 7681

                                                                        
Query: 694  caagccattgaaaatttaatcaacgaaaatgattggttggaagatactttcatggtcaat 753
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 7680 caagccattgaaaatttaatcaacgaaaatgattggttggaagatacttccatggtcaat 7621

                                                                        
Query: 754  agcactttttacacagaattagaacatttatttagattagttcaagaaacgtgcttccga 813
            |||| | || ||||||||| |||||||| || ||||| ||| ||||||||||| ||||||
Sbjct: 7620 agca-tcttgacacagaataagaacattaatctagatcagtacaagaaacgtggttccga 7562

                                                      
Query: 814  attagccgaaagctttcagagcttaataa-gaaggtgaaccc 854
             ||||||||||||||||||||||||| || ||||||||||||
Sbjct: 7561 tttagccgaaagctttcagagcttaagaaggaaggtgaaccc 7520


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8097
Number of Sequences: 1807
Number of extensions: 8097
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)