BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZA08FM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1589 1265 0.0 >3x_Contig1589 Length = 10239 Score = 1265 bits (638), Expect = 0.0 Identities = 734/762 (96%), Gaps = 3/762 (0%) Strand = Plus / Minus Query: 94 ctgataagaatgcacatgctagcaacgcaatgcagctatttaaccgtaatgaagaaattc 153 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8279 ctgagaagaatgcacatgctagcaacgcaatgcagctatttaaccgtaatgaagaaattc 8220 Query: 154 taactcaattgaaaaactttgtaaatgcacatatgtcagttgacatcattgaccaaagaa 213 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 8219 taactcaattgaaaaactgtg-aaatgcacatatgtcagttgacatcattgaccaaagaa 8161 Query: 214 ttttaaattgttataataaacattcaaagagatatggaagaattcaataaagacaagggt 273 | ||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8160 tacgaaactgagataataaacattcaaagagatatggaagaattcaataaagacaagggt 8101 Query: 274 tcaaagctcaggcagttagaagctaatctctctgaagtctctgcagaagtggaaaaatta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8100 tcaaagctcaggcagttagaagctaatctctctgaagtctctgcagaagtggaaaaatta 8041 Query: 334 gacactgatacggctaagctgtttgatgaatatcagaacttgagttttgacacagaacag 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8040 gacactgatacggctaagctgtttgatgaatatcagaacttgagttttgacacagaacag 7981 Query: 394 ctacacacagatatttctaacgcccaaaatgaagtatcaattgcagagaaaaggcttgca 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7980 ctacacacagatatttctaacgcccaaaatgaagtatcaattgcagagaaaaggcttgca 7921 Query: 454 gaactggaaacaacgtgtaatgagtacgagggcgttgtgaggaccaaaaagtctgaactt 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7920 gaactggaaacaacgtgtaatgagtacgagggcgttgtgaggaccaaaaagtctgaactt 7861 Query: 514 cacgaagtacacagtattttacaagaggaaatgtccagactttcaggaatggaagatgag 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7860 cacgaagtacacagtattttacaagaggaaatgtccagactttcaggaatggaagatgag 7801 Query: 574 atatcagaactagagttattgctttaaaaaaagaaccatctacttgcaactttggaagtg 633 |||||||||||||||||||||||| |||| ||||||||||||||| |||||| ||||||| Sbjct: 7800 atatcagaactagagttattgcttaaaaataagaaccatctactttcaacttcggaagtg 7741 Query: 634 gatttacagaagattacaaacgacttgcattaatacaagaataacacttttggcattgat 693 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 7740 gatttacagaagattacaaacgacttgcataaatacaagaataacacttttggcatcgat 7681 Query: 694 caagccattgaaaatttaatcaacgaaaatgattggttggaagatactttcatggtcaat 753 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 7680 caagccattgaaaatttaatcaacgaaaatgattggttggaagatacttccatggtcaat 7621 Query: 754 agcactttttacacagaattagaacatttatttagattagttcaagaaacgtgcttccga 813 |||| | || ||||||||| |||||||| || ||||| ||| ||||||||||| |||||| Sbjct: 7620 agca-tcttgacacagaataagaacattaatctagatcagtacaagaaacgtggttccga 7562 Query: 814 attagccgaaagctttcagagcttaataa-gaaggtgaaccc 854 ||||||||||||||||||||||||| || |||||||||||| Sbjct: 7561 tttagccgaaagctttcagagcttaagaaggaaggtgaaccc 7520 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8097 Number of Sequences: 1807 Number of extensions: 8097 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)