BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZA09RM1.SCF screened BAC_end (964 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1782 1544 0.0 >3x_Contig1782 Length = 24703 Score = 1544 bits (779), Expect = 0.0 Identities = 898/926 (96%), Gaps = 10/926 (1%) Strand = Plus / Plus Query: 44 gctttatccttacttggttgttttta-tgagtttttgggggctcttaacatggactagcg 102 ||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| Sbjct: 4213 gctttatccttacttggttgtttgcaatgagtttttgggg-ctcttaacatggactagcg 4271 Query: 103 acgatatttggaagagcgtattgatggttatatgctacatcgcagtaatcttgtatttcc 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4272 acgatatttggaagagcgtattgatggttatatgctacatcgcagtaatcttgtatttcc 4331 Query: 163 aagtggtggtaaggtactttggccatttcttgtttgtcggattgttatggggatattttg 222 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4332 aagtggtggtaaggtactttggccatttcttgtttgtcggattgttatggggatattctg 4391 Query: 223 ctttggatacttttgtggaaactaccattaaggaaaagcctacactagatgacattgtgc 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4392 ctttggatacttttgtggaaactaccattaaggaaaagcctacactagatgacattgtgc 4451 Query: 283 atatcatttcttgtgtgtacacgaaggctgatttattactttcgcccttgtccgtatgga 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4452 atatcatttcttgtgtgtacacgaaggctgatttattactttcgcccttgtccgtatgga 4511 Query: 343 cgggaaacgatattaagcggatacttttgacgatggcgtttctttcgcctgtctatgtaa 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4512 cgggaaacgatattaagcggatacttttgacgatggcgtttctttcgcctgtctatgtaa 4571 Query: 403 ttgtgtcaatattcatcttctcatcacagaaattggtattgatcgctggtgtttacgtgc 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4572 ttgtgtcaatattcatcttctcatcacagaaattggtattgatcgctggtgtttacgtgc 4631 Query: 463 tcacgtaccattcatcatggtctgtagtcactagaagattattgtggaaattaaaggttg 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4632 tcacgtaccattcatcatggtctgtagtcactagaagattattgtggaaattaaaggttg 4691 Query: 523 tccggttacttgtcttttacataaccggtcttgatttgagtggtgttaacaagcatcaag 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4692 tccggttacttgtcttttacataaccggtcttgatttgagtggtgttaacaagcatcaag 4751 Query: 583 gtggaatcttcgctgcagtgcataagaaagtcaagaatctttcatcgagctcgattggaa 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4752 gtggaatcttcgctgcagtgcataagaaagtcaagaatctttcatcgagctcgattggaa 4811 Query: 643 ccgatgcagatgatgggaaacccattagattcacttatgtattatatgagaaccagagac 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4812 ccgatgcagatgatgggaaacccattagattcacttatgtattatatgagaaccagagac 4871 Query: 703 gttggctcggtattggctggactgccaacatgttgacttacgagagaagttcatggacag 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4872 gttggctcggtattggctggactgccaacatgttgacttacgagagaagttcatggacag 4931 Query: 763 atgagtttttaaacgaggcaccatctccagaac-atttanactttcagaaga-gctagnn 820 ||||||||||||||||||||||||||||||||| ||||| |||| ||||||| ||||| Sbjct: 4932 atgagtttttaaacgaggcaccatctccagaacaatttaaacttccagaagaggctagcg 4991 Query: 821 cgtat-gcatggagaatgggtggattagacatgnagacttgacatgaccaatgattggag 879 |||| |||||||| |||||||||| ||||||| |||||||||||||||||||| ||||| Sbjct: 4992 -gtatggcatggag-atgggtggataagacatggagacttgacatgaccaatga-tggag 5048 Query: 880 -cattccactctcttatacgaggccaaagactacttgctcgcctggntgcggatgatggc 938 ||| | ||||||| ||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 5049 ccatccaactctctagtacgaggccaaagactactgcttcgcctgg-tgcggatgatggc 5107 Query: 939 ttcattnactacgataacccatggaa 964 |||||| ||||||||||| ||||||| Sbjct: 5108 ttcatttactacgataacacatggaa 5133 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5618 Number of Sequences: 1807 Number of extensions: 5618 Number of successful extensions: 29 Number of sequences better than 1.0e-20: 1 length of query: 964 length of database: 10,358,551 effective HSP length: 16 effective length of query: 948 effective length of database: 10,329,639 effective search space: 9792497772 effective search space used: 9792497772 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)