BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZA12RM1.SCF screened BAC_end (978 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig584 1626 0.0 >3x_Contig584 Length = 3317 Score = 1626 bits (820), Expect = 0.0 Identities = 907/932 (97%), Gaps = 4/932 (0%) Strand = Plus / Plus Query: 49 actttctgcaggtatgtttcaaggtcatgagtcaagttgatcaaattgaaattctcaagc 108 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 actttctgcaggtatgaatcaaggtcatgagtcaagttgatcaaattgaaattctcaagc 624 Query: 109 tctgcaacgtcagatttcttataagcaaagatcgatgaaaacccatgttgttcaatacgt 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 tctgcaacgtcagatttcttataagcaaagatcgatgaaaacccatgttgttcaatacgt 684 Query: 169 ctgaaaaatttctcatggaacaaacactcgttgttatcatcgtattggtagaatttatct 228 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 685 ctgaaaaatttctcatggaacaaacactcgttgttatcatcgtattggaagaatttatct 744 Query: 229 cgaagcagcgggtcgtattcacccagaatcccatagtagaccccaccagaaccggaataa 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 cgaagcagcgggtcgtattcacccagaatcccatagtagaccccaccagaaccggaataa 804 Query: 289 tttaaagatcgacggacatacctctgctgggggctttgcggcgtccgatttaaagtgttc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 tttaaagatcgacggacatacctctgctgggggctttgcggcgtccgatttaaagtgttc 864 Query: 349 aaattgtaaaaaggcgcatcctcattcaaaaacaccgcgagccattcatgttccatcata 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 865 aaattgtaaaaaggcgcatcctcattcaaaaacaccgcgagccattcatgttccatcata 924 Query: 409 gtgggcaaagagtctggctcaccctgcataaaactgcattcaatgcctcgattctcacac 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 925 gtgggcaaagagtctggctcaccctgcataaaactgcattcaatgcctcgattctcacac 984 Query: 469 aattggcatggtcctctatccgattctcttgtacattttttctttgatttggcacatgat 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 985 aattggcatggtcctctatccgattctcttgtacattttttctttgatttggcacatgat 1044 Query: 529 ctacacgaagtaggcgttctgccactagctcgagccctcttcttccccctgccatctcca 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1045 ctacacgaagtaggcgttctgccactagctcgagccctcttcttccccctgccatctcca 1104 Query: 589 aattctataatcatctcaccaggagtctttctcttgccatttctcttatcttcactcatc 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1105 aattctataatcatctcaccaggagtctttctcttgccatttctcttatcttcactcatc 1164 Query: 649 attcaaagtcaataagatacttttactcatggaattgaggctgatctccgacatcaataa 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1165 attcaaagtcaataagatacttttactcatggaattgaggctgatctccgacatcaataa 1224 Query: 709 ccttgagctggcaatggccagtccagatatcatattaaactacaataaaatagaagtagt 768 |||||||||||||||||| ||| |||||| | |||||| | ||||||| ||||||||| Sbjct: 1225 ccttgagctggcaatggcaagtaaagatataagattaaaagaaaataaaagagaagtagt 1284 Query: 769 ggccgatgggtctttgttcatgccaagttg-agcttaac-tggctgcatttagcatgatg 826 |||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 1285 ggccgatgggtc-ttgttcatgccaagttgaagcttaacttggctgcatttagcatgatg 1343 Query: 827 acgancagagaagagagtatctcacatgttatttacccgnaccaacattntgatagggga 886 |||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| Sbjct: 1344 acgacaagagaagagagtatctcacatgtta-ttacccggaccaacattttgatagggga 1402 Query: 887 atttcaacatcaacttgagcttcaaaaaccaacctttagctatgaacatattcagactaa 946 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1403 atttcaacatcaactgaagcttcaaaaaccaacctttagctatgaacatattcagactaa 1462 Query: 947 tttaaagtgaggcaactcagncactcgatacg 978 ||||||||||| |||||||| |||||||||| Sbjct: 1463 tttaaagtgagccaactcagcaactcgatacg 1494 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7022 Number of Sequences: 1807 Number of extensions: 7022 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 978 length of database: 10,358,551 effective HSP length: 16 effective length of query: 962 effective length of database: 10,329,639 effective search space: 9937112718 effective search space used: 9937112718 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)