BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZB01FM1.SCF screened BAC_end
         (911 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1597                                                        1459   0.0  

>3x_Contig1597 
          Length = 14240

 Score = 1459 bits (736), Expect = 0.0
 Identities = 794/807 (98%), Gaps = 5/807 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   ctacgctaccagaattaacagaaccattgaaatataacctaacaccgccaattgtgatag 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8803 ctacgctaccagaattaacagaaccattgaaatataacctaacaccgccaattgtgatag 8744

                                                                        
Query: 146  ctaccaaaaataaattgttattctcttctttcgaaaccacctctactttaactattttca 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8743 ctaccaaaaataaattgttattctcttctttcgaaaccacctctactttaactattttca 8684

                                                                        
Query: 206  aatatttgttacccaagatagcagctcctctagccggagtcgttcccatgatacgtttaa 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8683 aatatttgttacccaagatagcagctcctctagccggagtcgttcccatgatacgtttaa 8624

                                                                        
Query: 266  tataagagggttcgattgtagttggtccatctaaggatttaccattaatcttataagctc 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8623 tataagagggttcgattgtagttggtccatctaaggatttaccattaatcttataagctc 8564

                                                                        
Query: 326  ggatgactgattttgatgataatgagtacaaaataccacgcgattggtctacagtcaaat 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8563 ggatgactgattttgatgataatgagtacaaaataccacgcgattggtctacagtcaaat 8504

                                                                        
Query: 386  gtgtaatgtattcttgtgcatactttgaatcttcttcaaataaagattgtacaagtgccg 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8503 gtgtaatgtattcttgtgcatactttgaatcttcttcaaataaagattgtacaagtgccg 8444

                                                                        
Query: 446  agcctggaatcttggagaaaatatttgtggggagtaaactcaaaagagcagactgtgtca 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8443 agcctggaatcttggagaaaatatttgtggggagtaaactcaaaagagcagactgtgtca 8384

                                                                        
Query: 506  aacaaagtttgctgcatttattgttaaaccaatcttctgaagatgaatattgaagtt-cc 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 8383 aacaaagtttgctgcatttattgttaaaccaatcttctgaagatgaatattgaagttccc 8324

                                                                        
Query: 565  caaatgttggtcccattgctgttaccagaaaagaagatttgtcctgttttctcataataa 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8323 caaatgttggtcccattgctgttaccagaaaagaagatttgtcctgttttctcataataa 8264

                                                                        
Query: 625  acgatttcatgtacatccaatccatgaacagaaacgctcatccctgtgttgaagatattg 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8263 acgatttcatgtacatccaatccatgaacagaaacgctcatccctgtgttgaagatattg 8204

                                                                        
Query: 685  aacgagccgctgattctgtcataagaaattgcgagtatgtatatgtcaaaaggagttgtt 744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8203 aacgagccgctgattctgtcataagaaattgcgagtatgtatatgtcaaaaggagttgtt 8144

                                                                        
Query: 745  atcaataacaagtgggttgattgattccacgaatgtatcaggttttcggnttcactaggg 804
            ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||| ||
Sbjct: 8143 atcaataacaagt-ggttgattgattccacgaatgtatcagg-tttcggtttcacta-gg 8087

                                                                        
Query: 805  gcaacttgaaatatggtatgcttgatgtcatctattgattgggaatctgaa-agttaata 863
            |||||||| ||||||||||||||||||||||||||||||||| ||||||||  |||| ||
Sbjct: 8086 gcaacttgtaatatggtatgcttgatgtcatctattgattggaaatctgaagggttatta 8027

                                       
Query: 864  taattgccgaggatcaacttgctatca 890
            ||||  | |||||||||||||||||||
Sbjct: 8026 taatgccagaggatcaacttgctatca 8000


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7360
Number of Sequences: 1807
Number of extensions: 7360
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)