BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZB01RM1.SCF screened BAC_end
         (924 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1683                                                        1592   0.0  

>3x_Contig1683 
          Length = 16378

 Score = 1592 bits (803), Expect = 0.0
 Identities = 850/861 (98%), Gaps = 4/861 (0%)
 Strand = Plus / Plus

                                                                         
Query: 49    tgatattatgtctatatcttatatataaatatcatcgcgactactcctttaattgaaatt 108
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9487  tgatattatgtctatatcttatatataaatatcatcgcgactactcctttaattgaaatt 9546

                                                                         
Query: 109   tatgtttgttcctagtttctcagcaggaggaagattttctttcattagtctataaggctc 168
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9547  tatgtttgttcctagtttctcagcaggaggaagattttctttcattagtctataaggctc 9606

                                                                         
Query: 169   acctttccaccgctagtccaatatcttctatactctcccttccgagtagagaaaaaaaga 228
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9607  acctttccaccgctagtccaatatcttctatactctcccttccgagtagagaaaaaaaga 9666

                                                                         
Query: 229   ataaataatgataacatatcatctttacagcttatattgatatataggaaagatcaatag 288
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9667  ataaataatgataacatatcatctttacagcttatattgatatataggaaagatcaatag 9726

                                                                         
Query: 289   aaagtagtttaaaataacaactgtgtggacatcgttctacaaggttcagaaatggcatta 348
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9727  aaagtagtttaaaataacaactgtgtggacatcgttctacaaggttcagaaatggcatta 9786

                                                                         
Query: 349   ttcaatgagaataatgtgagaatggaaaataacataaaaattgggttgttaaaaggaata 408
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9787  ttcaatgagaataatgtgagaatggaaaataacataaaaattgggttgttaaaaggaata 9846

                                                                         
Query: 409   taaatgggaatgaaaaaaacaatttcgaaccattacaccctagcgttttcttaatttcaa 468
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9847  taaatgggaatgaaaaaaacaatttcgaaccattacaccctagcgttttcttaatttcaa 9906

                                                                         
Query: 469   tgtggccacttgatcttctaatttctttacttcggcttgaatcttttccaaatcaccgtt 528
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9907  tgtggccacttgatcttctaatttctttacttcggcttgaatcttttccaaatcaccgtt 9966

                                                                         
Query: 529   cagtttaattctttcattcacaatgttttgttcccactgtctgaatctttgttcttcggc 588
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9967  cagtttaattctttcattcacaatgttttgttcccactgtctgaatctttgttcttcggc 10026

                                                                         
Query: 589   cttaacttgatcagtgaagtatttttttagtgcgttttcttcttctttgaactttggatt 648
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10027 cttaacttgatcagtgaagtatttttttagtgcgttttcttcttctttgaactttggatt 10086

                                                                         
Query: 649   atgtgataattttcttgctggtgcagcaacgaagttgttcgccgatttttcttctagttc 708
             |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 10087 atgtgataattttcttgctggtgcagcaacgaagttgttcgccgatttttctcctagttc 10146

                                                                         
Query: 709   gttatcgttagacgatccattcanatgagattccaaacgtaatctcctataggtttcgta 768
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10147 gttatcgttagacgatccattcaaatgagattccaaacgtaatctcctataggtttcgta 10206

                                                                         
Query: 769   atgtagctcttgagtggataagacnaagatcttacagatttgttctcaacaaccacgatc 828
             |||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 10207 atgtagctcttgagtggataagac-aagatctaacagatttgttctcaacaacaacgatc 10265

                                                                         
Query: 829   ttcaatttgcggaaatcacagnngttgatcattnctctacttccactaacccccatggat 888
              ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||
Sbjct: 10266 -tcaatttgcggaaatcacag-tgttgatcatt-ctctacttccactaacccccatggat 10322

                                  
Query: 889   attttcttgtcacaactttgg 909
             |||||||||  ||||||||||
Sbjct: 10323 attttcttgcaacaactttgg 10343


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9391
Number of Sequences: 1807
Number of extensions: 9391
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)