BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZB04FM1.SCF screened BAC_end
         (917 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1653                                                        1578   0.0  

>3x_Contig1653 
          Length = 14012

 Score = 1578 bits (796), Expect = 0.0
 Identities = 824/831 (99%), Gaps = 2/831 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   tgatgtcattttgccaaaatgtctgttgtacattatatatttttaccttaatgtccagcc 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6478 tgatgtcattttgccaaaatgtctgttgtacattatatatttttaccttaatgtccagcc 6537

                                                                        
Query: 146  atcagttcccttcgtatttcaatcacacaactctgacaggaattaaatcatctcttttca 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6538 atcagttcccttcgtatttcaatcacacaactctgacaggaattaaatcatctcttttca 6597

                                                                        
Query: 206  gtcccaacgctaacagtattttcataagactcagcttggcttgcaaaattaacacgcgta 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6598 gtcccaacgctaacagtattttcataagactcagcttggcttgcaaaattaacacgcgta 6657

                                                                        
Query: 266  ctataggatatttggaaatgtcgctatatcatagcctagtatttgctatcttagtcgtgg 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6658 ctataggatatttggaaatgtcgctatatcatagcctagtatttgctatcttagtcgtgg 6717

                                                                        
Query: 326  aattgattacattgactttgttaggtcttccacttccctcgaagtttaagaaacctgtca 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6718 aattgattacattgactttgttaggtcttccacttccctcgaagtttaagaaacctgtca 6777

                                                                        
Query: 386  tctctgccctttcgaaacctttcttttctcctacggttcagataacaatcaaatgcttac 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6778 tctctgccctttcgaaacctttcttttctcctacggttcagataacaatcaaatgcttac 6837

                                                                        
Query: 446  tagcattcattctattacttttcgttgattctataaataaagtctacagcgtagagggcg 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6838 tagcattcattctattacttttcgttgattctataaataaagtctacagcgtagagggcg 6897

                                                                        
Query: 506  aattggataagctaaaggaagtaggtacaggtactcatcctcaaggaagaatggagattt 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6898 aattggataagctaaaggaagtaggtacaggtactcatcctcaaggaagaatggagattt 6957

                                                                        
Query: 566  tatcaagaaagttcttctggcagaggaacatgtacttaacgggcattactttgttcttaa 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6958 tatcaagaaagttcttctggcagaggaacatgtacttaacgggcattactttgttcttaa 7017

                                                                        
Query: 626  catttgtattgagccgtaccgttaaccttgtctgggagttattcgagctaaaagaggatt 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7018 catttgtattgagccgtaccgttaaccttgtctgggagttattcgagctaaaagaggatt 7077

                                                                        
Query: 686  atcatttgatcttgaaatcggaggaagataaactggctcctcaacaaaaggcattagaaa 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7078 atcatttgatcttgaaatcggaggaagataaactggctcctcaacaaaaggcattagaaa 7137

                                                                        
Query: 746  aagaaattgaatctgtagatgaggaaattacaagattgaaggagcaggcctctgctttac 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7138 aagaaattgaatctgtagatgaggaaattacaagattgaaggagcaggcctctgctttac 7197

                                                                        
Query: 806  agaaagagatggagtaaaaccagggaatgggatatgnacctttatgaccttacgtctata 865
            ||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||
Sbjct: 7198 agaaagagatggagtaaaaccagggaatgggatatgaccttttatgaccttacgtctata 7257

                                                               
Query: 866  tgtatatatatatataagtaaagcgaaaaata-ttacatgtctatgattca 915
            ||||||||||||||||| |  ||||||||||| ||||||||||||||||||
Sbjct: 7258 tgtatatatatatataact-cagcgaaaaatatttacatgtctatgattca 7307


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,320
Number of Sequences: 1807
Number of extensions: 10320
Number of successful extensions: 771
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)