BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZB04FM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1653 1578 0.0 >3x_Contig1653 Length = 14012 Score = 1578 bits (796), Expect = 0.0 Identities = 824/831 (99%), Gaps = 2/831 (0%) Strand = Plus / Plus Query: 86 tgatgtcattttgccaaaatgtctgttgtacattatatatttttaccttaatgtccagcc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6478 tgatgtcattttgccaaaatgtctgttgtacattatatatttttaccttaatgtccagcc 6537 Query: 146 atcagttcccttcgtatttcaatcacacaactctgacaggaattaaatcatctcttttca 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6538 atcagttcccttcgtatttcaatcacacaactctgacaggaattaaatcatctcttttca 6597 Query: 206 gtcccaacgctaacagtattttcataagactcagcttggcttgcaaaattaacacgcgta 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6598 gtcccaacgctaacagtattttcataagactcagcttggcttgcaaaattaacacgcgta 6657 Query: 266 ctataggatatttggaaatgtcgctatatcatagcctagtatttgctatcttagtcgtgg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6658 ctataggatatttggaaatgtcgctatatcatagcctagtatttgctatcttagtcgtgg 6717 Query: 326 aattgattacattgactttgttaggtcttccacttccctcgaagtttaagaaacctgtca 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6718 aattgattacattgactttgttaggtcttccacttccctcgaagtttaagaaacctgtca 6777 Query: 386 tctctgccctttcgaaacctttcttttctcctacggttcagataacaatcaaatgcttac 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6778 tctctgccctttcgaaacctttcttttctcctacggttcagataacaatcaaatgcttac 6837 Query: 446 tagcattcattctattacttttcgttgattctataaataaagtctacagcgtagagggcg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6838 tagcattcattctattacttttcgttgattctataaataaagtctacagcgtagagggcg 6897 Query: 506 aattggataagctaaaggaagtaggtacaggtactcatcctcaaggaagaatggagattt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6898 aattggataagctaaaggaagtaggtacaggtactcatcctcaaggaagaatggagattt 6957 Query: 566 tatcaagaaagttcttctggcagaggaacatgtacttaacgggcattactttgttcttaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6958 tatcaagaaagttcttctggcagaggaacatgtacttaacgggcattactttgttcttaa 7017 Query: 626 catttgtattgagccgtaccgttaaccttgtctgggagttattcgagctaaaagaggatt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7018 catttgtattgagccgtaccgttaaccttgtctgggagttattcgagctaaaagaggatt 7077 Query: 686 atcatttgatcttgaaatcggaggaagataaactggctcctcaacaaaaggcattagaaa 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7078 atcatttgatcttgaaatcggaggaagataaactggctcctcaacaaaaggcattagaaa 7137 Query: 746 aagaaattgaatctgtagatgaggaaattacaagattgaaggagcaggcctctgctttac 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7138 aagaaattgaatctgtagatgaggaaattacaagattgaaggagcaggcctctgctttac 7197 Query: 806 agaaagagatggagtaaaaccagggaatgggatatgnacctttatgaccttacgtctata 865 |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 7198 agaaagagatggagtaaaaccagggaatgggatatgaccttttatgaccttacgtctata 7257 Query: 866 tgtatatatatatataagtaaagcgaaaaata-ttacatgtctatgattca 915 ||||||||||||||||| | ||||||||||| |||||||||||||||||| Sbjct: 7258 tgtatatatatatataact-cagcgaaaaatatttacatgtctatgattca 7307 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,320 Number of Sequences: 1807 Number of extensions: 10320 Number of successful extensions: 771 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)