BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZC01FM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig757 1511 0.0 >3x_Contig757 Length = 2436 Score = 1511 bits (762), Expect = 0.0 Identities = 856/878 (97%), Gaps = 8/878 (0%) Strand = Plus / Plus Query: 87 tgggtagacaacagaacgttgaggtgaaattacctaatttcgctagaaatattgaaatta 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 tgggtagacaacagaacgttgaggtgaaattacctaatttcgctagaaatattgaaatta 313 Query: 147 acttgccatcgatcgatgttagcactgcaagccaaaatcaattaaggactttcttgacaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 acttgccatcgatcgatgttagcactgcaagccaaaatcaattaaggactttcttgacaa 373 Query: 207 agaacaccacccagtatttgttgagcagaacagcattagacttcggctcaactgaagcta 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 agaacaccacccagtatttgttgagcagaacagcattagacttcggctcaactgaagcta 433 Query: 267 agctgcaacagtttgttgaaaactatcaagccgttttagcgcaaaactcggttgctgaca 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 agctgcaacagtttgttgaaaactatcaagccgttttagcgcaaaactcggttgctgaca 493 Query: 327 tttacgacaaatacgtatcccaatacaaacagctgttaactcaaaaggctactgaatctg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 tttacgacaaatacgtatcccaatacaaacagctgttaactcaaaaggctactgaatctg 553 Query: 387 aaacgacagaagaagctcatgcagatgcacaagcagaagaaacgaaataaaggatagact 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 aaacgacagaagaagctcatgcagatgcacaagcagaagaaacgaaataaaggatagact 613 Query: 447 tatccgtaaccaatatttcccagaaccgttcatgtatatatatataagaatcaacgtcag 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 tatccgtaaccaatatttcccagaaccgttcatgtatatatatataagaatcaacgtcag 673 Query: 507 ttaagaatattactagaaattcaaaaaacattaacaaaatgaccataattcataaagaaa 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 674 ttaagaatattactagaaattcaaaaaacattaacaaaatgaccataattcataaagaaa 733 Query: 567 ctcacacaatatacttctattatataattattgatgtgccgtcacggattcatcgcaaat 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 ctcacacaatatacttctattatataattattgatgtgccgtcacggattcatcgcaaat 793 Query: 627 tgagtaaat-gttcgtcaattagcgcctggtaccatgtcactcccgctagccaactcggg 685 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 794 tgagtaaatcgttcgtcaa-tagcgcctggtaccatgtcactcccgctagccaactcggg 852 Query: 686 cactgagtttgttcgatctgcaaggaaatcaccgtcaacgagttttccatcattctttnt 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 853 cactgagtttgttcgatctgcaaggaaatcaccgtcaacgagttttccatcattcttttt 912 Query: 746 aagaattt-aattntggtgaaa-tattc-aaagctgacat-aataccaatcgatgatctc 801 |||||||| |||| |||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 913 aagaatttcaattttggtgaaattattcaaaagctgacataaataccaatcgatgatctc 972 Query: 802 gcagttcctgtgatccaacggaaatctattggc-aataacggtatacttttgagtatcaa 860 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 973 gcagttcctgtgatccaacggaaatctattggcaaataacggtatactttgaggtatcaa 1032 Query: 861 atcaccccatatgacaggaggagctaaggaggcttncaggaaagaaactaatactgaaaa 920 |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1033 atcaccaataatgacaggaggagctaaggaggcttcagggaaagaaactaatactgaaaa 1092 Query: 921 gac-gcnaatgcccaagaaggagaaaaacctttatcta 957 ||| || ||||| ||||||||||||||||||||||||| Sbjct: 1093 gacggcaaatgcacaagaaggagaaaaacctttatcta 1130 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9207 Number of Sequences: 1807 Number of extensions: 9207 Number of successful extensions: 98 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)