BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZC01RM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1640 1594 0.0 >3x_Contig1640 Length = 15521 Score = 1594 bits (804), Expect = 0.0 Identities = 871/891 (97%), Gaps = 2/891 (0%) Strand = Plus / Plus Query: 48 cggcatacttatgacattatctaccagagaccggacaacataataggcatacaatctgat 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13399 cggcatacttatgacattatctaccagagaccggacaacataataggcatacaatctgat 13458 Query: 108 gaccaaaaacgcttcctattggccagtaagctcattaaagcgtctgtctctattcttatc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13459 gaccaaaaacgcttcctattggccagtaagctcattaaagcgtctgtctctattcttatc 13518 Query: 168 tggcgtctaattgatgtagtggtttccccttgtctctgattcgtgactttttatagggca 227 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 13519 tggcgtctaattgatgtagtggtttccccttgtctctgattcgtgactcaagatagggca 13578 Query: 228 gacagccacatagaagcaatcaataaccgaccgatgcttcgctgtcctagtattattcaa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13579 gacagccacatagaagcaatcaataaccgaccgatgcttcgctgtcctagtattattcaa 13638 Query: 288 tagggattggcgtagaaaatcgcacggaagcagcagcgaaaaaaagcctttcattttacg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13639 tagggattggcgtagaaaatcgcacggaagcagcagcgaaaaaaagcctttcattttacg 13698 Query: 348 tagtttttctggcgtttttttgttgtgaatttgacctttttatttacttgtcttgtgttt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13699 tagtttttctggcgtttttttgttgtgaatttgacctttttatttacttgtcttgtgttt 13758 Query: 408 ttttctcaacgttcctctgccacagagaagcaggttggaatttcaacctttcaaatattt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13759 ttttctcaacgttcctctgccacagagaagcaggttggaatttcaacctttcaaatattt 13818 Query: 468 agaccagtttgaaacattcttccggggtttctctatggcttctatttcattcatttatct 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13819 agaccagtttgaaacattcttccggggtttctctatggcttctatttcattcatttatct 13878 Query: 528 gttatcctcaagtatatataaatatgggatgtacatgccatgggcaatttaagacgaaat 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13879 gttatcctcaagtatatataaatatgggatgtacatgccatgggcaatttaagacgaaat 13938 Query: 588 catctaaccggtaaacgactggtgtttttttntttggttgatggtttccttaaattatac 647 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 13939 catctaaccggtaaacgactggtgtttttttttttggttgatggtttccttaaattatac 13998 Query: 648 aaatccagagattatcatatctaattaaccgctgtctgctctgctttcactgctttcgca 707 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13999 aaatccagagataatcatatctaattaaccgctgtctgctctgctttcactgctttcgca 14058 Query: 708 tcaccgttttctttctttttacctttttttagaaataaagatcttactggtactgctacg 767 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14059 tcaccgttttc-ttctttttaccttttttaagaaataaagatcttactggtactgctacg 14117 Query: 768 ctaggtcatccacttgtgatttaataacattgacatttgaaaacttctttattttctaat 827 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 14118 ctaggtcatccacttgtgatttaataacattgacattagaaaacttctttattttctaat 14177 Query: 828 atttactggcacatattaccgcttttattattatttgggagaaaaagttctttttttctt 887 ||||||||||||||||||||||| ||||||||||||| ||||||| | ||||||||||| Sbjct: 14178 atttactggcacatattaccgctattattattatttgagagaaaagttactttttttctt 14237 Query: 888 ttaaccggaccttttaaaat-ttacaaaattgaaactgtcccttttttaga 937 | |||||||||||||||||| | ||| |||||| |||||| |||||||||| Sbjct: 14238 taaaccggaccttttaaaatctcacagaattgatactgtcacttttttaga 14288 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9003 Number of Sequences: 1807 Number of extensions: 9003 Number of successful extensions: 75 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)