BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZC03RM1.SCF screened BAC_end (973 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig688 1663 0.0 >3x_Contig688 Length = 2555 Score = 1663 bits (839), Expect = 0.0 Identities = 907/923 (98%), Gaps = 5/923 (0%) Strand = Plus / Plus Query: 44 gctttcgtttgttgtggaccaagtgttggaacaagcaaatgttttggtaggacttccaag 103 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 939 gctttcgtttgttgtggaccaagagttggaacaagcaaatgttttggtaggacttccaag 998 Query: 104 tgaaaacttggaagctggctatactttaaagaagcaaagtgggagctctgacaaattttc 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 tgaaaacttggaagctggctatactttaaagaagcaaagtgggagctctgacaaattttc 1058 Query: 164 cttagccattcctctaccaaaacttgcacatgccttcaacgatagagcagagcttttt-t 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1059 cttagccattcctctaccaaaacttgcacatgccttcaacgatagagcagagctacaagt 1118 Query: 223 gaaccttttagtatccacagaagaaaattcattggttaaggaattattcatattgtccat 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1119 gaaccttttagtatccacagaagaaaattcattggttaaggaattattcatattgtccat 1178 Query: 283 tgttgatcctgtaacaaatacccgtgatactgcgagaaactttgttagattgaatccgaa 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1179 tgttgatcctgtaacaaatacccgtgatactgcgagaaactttgttagattgaatccgaa 1238 Query: 343 ggaggaaattcatcacattttccaaagttcacctaagaccgtcaatgcgttcatcgctca 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1239 ggaggaaattcatcacattttccaaagttcacctaagaccgtcaatgcgttcatcgctca 1298 Query: 403 actgtttgcattggtaattactaccactttattcgtgttgtttgtctcctgggtatcttt 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 actgtttgcattggtaattactaccactttattcgtgttgtttgtctcctgggtatcttt 1358 Query: 463 cggtgctgttaatttcaacttgaagaatgtatcttcgtacttatttgttgcactagtttc 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1359 cggtgctgttaatttcaacttgaagaatgtatcttcgtacttatttgttgcactagtttc 1418 Query: 523 cggtttcgagttcatcttctacaagtactattccggtacctcaatatttgacaccgtatt 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1419 cggtttcgagttcatcttctacaagtactattccggtacctcaatatttgacaccgtatt 1478 Query: 583 ctctactggtttgttgttcttaccagctttgttgcttggttctgctactctgaagtcatt 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1479 ctctactggtttgttgttcttaccagctttgttgcttggttctgctactctgaagtcatt 1538 Query: 643 gaaacaatgatgatcttcgacaagtcttagttccgcaattaaatagccggtaaatagttc 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1539 gaaacaatgatgatcttcgacaagtcttagttccgcaattaaatagccggtaaatagttc 1598 Query: 703 gaaatacaaaagatctatcagagccgattaacatacttctatagctacattcaatacgaa 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1599 gaaatacaaaagatctatcagagccgattaacatacttctatagctacattcaatacgaa 1658 Query: 763 cataaacttctataaacattcctatttcatcattgaactttatcatttctcatcaaaata 822 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1659 cataaacttctataaacattcctatttcatcattgaactttatcatttctcatcaaaata 1718 Query: 823 gctgttagtgatttctctaaaccccc-aaaagtcgatagaggctttgctg-aatcgttcg 880 |||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 1719 gctgttagtgatttctctaaacccccaaaaagtcgatagaggc-ttgctgaaatcgttcg 1777 Query: 881 ctgctacgatctttcccttgatt-aaccctttggtatcgaattatatgtcctggagttta 939 ||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| || Sbjct: 1778 ctgctacgatcttccccttgattaaacccttgggtatcgaattatatgtcctggagtcta 1837 Query: 940 aactatgaaaaagaatggcccca 962 |||||||| ||||| || ||||| Sbjct: 1838 aactatgagaaagattgtcccca 1860 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7641 Number of Sequences: 1807 Number of extensions: 7641 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 973 length of database: 10,358,551 effective HSP length: 16 effective length of query: 957 effective length of database: 10,329,639 effective search space: 9885464523 effective search space used: 9885464523 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)