BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZC05RM1.SCF screened BAC_end
         (924 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1621                                                        1659   0.0  

>3x_Contig1621 
          Length = 10398

 Score = 1659 bits (837), Expect = 0.0
 Identities = 867/877 (98%), Gaps = 1/877 (0%)
 Strand = Plus / Plus

                                                                        
Query: 49   ctcccttgagttgtacttatcgattgatcaaaaaccaagtgttcatttccgtttttttcg 108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7795 ctcccttgagttgtacttatcgattgatcaaaaaccaagtgttcatttccgtttttttcg 7854

                                                                        
Query: 109  ttccttgcaatcttagcaaagttacaattaacattagactaggcccttccaattaatctt 168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7855 ttccttgcaatcttagcaaagttacaattaacattagactaggcccttccaattaatctt 7914

                                                                        
Query: 169  ttaattgaccaccagttactgaagaaatcatgtctaaaagatcttctagtgtagcgaaca 228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7915 ttaattgaccaccagttactgaagaaatcatgtctaaaagatcttctagtgtagcgaaca 7974

                                                                        
Query: 229  ctccagttaaaaggaagcatttacactctactttgaatcataagtttgttagcatcaatt 288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7975 ctccagttaaaaggaagcatttacactctactttgaatcataagtttgttagcatcaatt 8034

                                                                        
Query: 289  ctcaagatgattataaacatttgtatagatctgttgttccacttgacatttttgtatggg 348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8035 ctcaagatgattataaacatttgtatagatctgttgttccacttgacatttttgtatggg 8094

                                                                        
Query: 349  gaactggatcaatgtgtgaactaggcttgggtcctctagctaaaaacaaagaagttaaga 408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8095 gaactggatcaatgtgtgaactaggcttgggtcctctagctaaaaacaaagaagttaaga 8154

                                                                        
Query: 409  gacctagactcaatccccttttgccccgtgatgaggctaaaattgtgtcttttgctgcag 468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8155 gacctagactcaatccccttttgccccgtgatgaggctaaaattgtgtcttttgctgcag 8214

                                                                        
Query: 469  gtggaatgcacaccctagcgctagacgctgacaataacatctggtcgtgggggactaacg 528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8215 gtggaatgcacaccctagcgctagacgctgacaataacatctggtcgtgggggactaacg 8274

                                                                        
Query: 529  actcaggtgctttgggtagagacactagcggagctgtagaaaaattgaaagatatggatg 588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8275 actcaggtgctttgggtagagacactagcggagctgtagaaaaattgaaagatatggatg 8334

                                                                        
Query: 589  caaatgatagtgatgatgatgaagatggtgacctcaacgaaattgaatccactccaacta 648
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8335 caaatgatagtgatgatgatgaagatggtgacctcaacgaaattgaatccactccaacta 8394

                                                                        
Query: 649  aaattcctagagactctttaccattggacgaattaagatgtgtacagattgctgccacag 708
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8395 aaattcctagagactctttaccattggacgaattaagatgtgtacagattgctgccacag 8454

                                                                        
Query: 709  acaatctatctgctgctctatttgaaaatggtgacgtttacgcttggggtaccttccgtt 768
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8455 acaatctatctgctgctctatttgaaaatggtgacgtttacgcttggggtaccttccgtt 8514

                                                                        
Query: 769  gtaacgaaggtattttaggtttctacagagatgagattaccgtccagaaaaccccttgga 828
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8515 gtaacgaaggtattttaggtttctacagagatgagattaccgtccagaaaaccccttgga 8574

                                                                        
Query: 829  taatcccttacttctnncagaaagccaanattgttcaaatggctgctggngaaga-cata 887
            |||||||| ||||||   |||||||||| ||||||||||||||||||||  |||| ||||
Sbjct: 8575 taatccctaacttctccaagaaagccaagattgttcaaatggctgctgggaaagatcata 8634

                                                 
Query: 888  ttatgttcttggatgaaactggtattgtttacgcctg 924
            |  ||||||||||||||||||||||||||||||||||
Sbjct: 8635 tattgttcttggatgaaactggtattgtttacgcctg 8671


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7091
Number of Sequences: 1807
Number of extensions: 7091
Number of successful extensions: 85
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)