BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZC05RM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1621 1659 0.0 >3x_Contig1621 Length = 10398 Score = 1659 bits (837), Expect = 0.0 Identities = 867/877 (98%), Gaps = 1/877 (0%) Strand = Plus / Plus Query: 49 ctcccttgagttgtacttatcgattgatcaaaaaccaagtgttcatttccgtttttttcg 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7795 ctcccttgagttgtacttatcgattgatcaaaaaccaagtgttcatttccgtttttttcg 7854 Query: 109 ttccttgcaatcttagcaaagttacaattaacattagactaggcccttccaattaatctt 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7855 ttccttgcaatcttagcaaagttacaattaacattagactaggcccttccaattaatctt 7914 Query: 169 ttaattgaccaccagttactgaagaaatcatgtctaaaagatcttctagtgtagcgaaca 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7915 ttaattgaccaccagttactgaagaaatcatgtctaaaagatcttctagtgtagcgaaca 7974 Query: 229 ctccagttaaaaggaagcatttacactctactttgaatcataagtttgttagcatcaatt 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7975 ctccagttaaaaggaagcatttacactctactttgaatcataagtttgttagcatcaatt 8034 Query: 289 ctcaagatgattataaacatttgtatagatctgttgttccacttgacatttttgtatggg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8035 ctcaagatgattataaacatttgtatagatctgttgttccacttgacatttttgtatggg 8094 Query: 349 gaactggatcaatgtgtgaactaggcttgggtcctctagctaaaaacaaagaagttaaga 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8095 gaactggatcaatgtgtgaactaggcttgggtcctctagctaaaaacaaagaagttaaga 8154 Query: 409 gacctagactcaatccccttttgccccgtgatgaggctaaaattgtgtcttttgctgcag 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8155 gacctagactcaatccccttttgccccgtgatgaggctaaaattgtgtcttttgctgcag 8214 Query: 469 gtggaatgcacaccctagcgctagacgctgacaataacatctggtcgtgggggactaacg 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8215 gtggaatgcacaccctagcgctagacgctgacaataacatctggtcgtgggggactaacg 8274 Query: 529 actcaggtgctttgggtagagacactagcggagctgtagaaaaattgaaagatatggatg 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8275 actcaggtgctttgggtagagacactagcggagctgtagaaaaattgaaagatatggatg 8334 Query: 589 caaatgatagtgatgatgatgaagatggtgacctcaacgaaattgaatccactccaacta 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8335 caaatgatagtgatgatgatgaagatggtgacctcaacgaaattgaatccactccaacta 8394 Query: 649 aaattcctagagactctttaccattggacgaattaagatgtgtacagattgctgccacag 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8395 aaattcctagagactctttaccattggacgaattaagatgtgtacagattgctgccacag 8454 Query: 709 acaatctatctgctgctctatttgaaaatggtgacgtttacgcttggggtaccttccgtt 768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8455 acaatctatctgctgctctatttgaaaatggtgacgtttacgcttggggtaccttccgtt 8514 Query: 769 gtaacgaaggtattttaggtttctacagagatgagattaccgtccagaaaaccccttgga 828 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8515 gtaacgaaggtattttaggtttctacagagatgagattaccgtccagaaaaccccttgga 8574 Query: 829 taatcccttacttctnncagaaagccaanattgttcaaatggctgctggngaaga-cata 887 |||||||| |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 8575 taatccctaacttctccaagaaagccaagattgttcaaatggctgctgggaaagatcata 8634 Query: 888 ttatgttcttggatgaaactggtattgtttacgcctg 924 | |||||||||||||||||||||||||||||||||| Sbjct: 8635 tattgttcttggatgaaactggtattgtttacgcctg 8671 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7091 Number of Sequences: 1807 Number of extensions: 7091 Number of successful extensions: 85 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)