BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZD03FM1.SCF screened BAC_end
         (985 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig668                                                         1538   0.0  

>3x_Contig668 
          Length = 3128

 Score = 1538 bits (776), Expect = 0.0
 Identities = 879/902 (97%), Gaps = 10/902 (1%)
 Strand = Plus / Plus

                                                                        
Query: 86   tctcattaagcaagcgttgtctgatttgaaagtatttcgtaaaaccttagaaaaggttga 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388  tctcattaagcaagcgttgtctgatttgaaagtatttcgtaaaaccttagaaaaggttga 447

                                                                        
Query: 146  aattcaacaatatttaacaggttctctgtaaatgaaaacccaatctccgatagtggtgcc 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448  aattcaacaatatttaacaggttctctgtaaatgaaaacccaatctccgatagtggtgcc 507

                                                                        
Query: 206  cagaacatccgttggatttcagagtagattcgattgtataaacttccggttacatagtgc 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508  cagaacatccgttggatttcagagtagattcgattgtataaacttccggttacatagtgc 567

                                                                        
Query: 266  atgttagagtctgtgttgggccgtatactccctgattcactgaccttattgttcgaaaac 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568  atgttagagtctgtgttgggccgtatactccctgattcactgaccttattgttcgaaaac 627

                                                                        
Query: 326  ttacacatcttacagcagcctcggtgtagatttaaggctcgactatatctattgaaatct 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628  ttacacatcttacagcagcctcggtgtagatttaaggctcgactatatctattgaaatct 687

                                                                        
Query: 386  actacttacttcaattaagccgagagagagagagaacttgctttggtttctttgactgtt 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688  actacttacttcaattaagccgagagagagagagaacttgctttggtttctttgactgtt 747

                                                                        
Query: 446  tgatccactatagtgagtattattgttttattttataatatcaagtgctctgtagttcaa 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748  tgatccactatagtgagtattattgttttattttataatatcaagtgctctgtagttcaa 807

                                                                        
Query: 506  ggttattcgtcatgagcgcactggtacggcactcaccgttgatagggttggggttccttc 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808  ggttattcgtcatgagcgcactggtacggcactcaccgttgatagggttggggttccttc 867

                                                                        
Query: 566  aaagcaccgtttaccctaaaaaggtcacgtgttatttttcgacttgcatgtggaaatgtc 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868  aaagcaccgtttaccctaaaaaggtcacgtgttatttttcgacttgcatgtggaaatgtc 927

                                                                        
Query: 626  attcgagcattggaaaagttattggtataagaacgacgtcgatgaggacaacggtaccaa 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928  attcgagcattggaaaagttattggtataagaacgacgtcgatgaggacaacggtaccaa 987

                                                                        
Query: 686  cgagaaggatctgttcaagcggtagattgttgttacagtttggttctcgagcaagacaga 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988  cgagaaggatctgttcaagcggtagattgttgttacagtttggttctcgagcaagacaga 1047

                                                                        
Query: 746  agcaggaagatctagactaccagcaagcaatactacgtagaaacatggcacaacatccta 805
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1048 agcaggaagatctagactaccagcaagcaata-tacgtagaaacatggcacaacatccta 1106

                                                                        
Query: 806  aggttatttgtcctgggtatccattattggatatccaagttgacgttacagagtcctatt 865
            |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 aggttatttgtcttggtaatccattattggatatccaagttgacgttacagagtcctatt 1166

                                                                        
Query: 866  tggcaaagtaccgttttgatgagc-acgacgcaatctttgtaagaacttggttcttggtg 924
            |||||||||| || ||||| |||| ||||||||||||| || ||||  |||||| |||||
Sbjct: 1167 tggcaaagta-cggtttgaagagcaacgacgcaatcttggt-agaagctggttc-tggtg 1223

                                                                        
Query: 925  atagctaa-ttgaacatttttctaatgagatcgttnaaatggaagaatgtcaagtttgtt 983
            || ||||| |||||||||||    ||||||||||  | ||||||| ||||||||||||||
Sbjct: 1224 at-gctaagttgaacatttt--cgatgagatcgtcgagatggaag-atgtcaagtttgtt 1279

              
Query: 984  gc 985
            ||
Sbjct: 1280 gc 1281


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6766
Number of Sequences: 1807
Number of extensions: 6766
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 985
length of database: 10,358,551
effective HSP length: 16
effective length of query: 969
effective length of database: 10,329,639
effective search space: 10009420191
effective search space used: 10009420191
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)