BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZD03FM1.SCF screened BAC_end (985 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig668 1538 0.0 >3x_Contig668 Length = 3128 Score = 1538 bits (776), Expect = 0.0 Identities = 879/902 (97%), Gaps = 10/902 (1%) Strand = Plus / Plus Query: 86 tctcattaagcaagcgttgtctgatttgaaagtatttcgtaaaaccttagaaaaggttga 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 tctcattaagcaagcgttgtctgatttgaaagtatttcgtaaaaccttagaaaaggttga 447 Query: 146 aattcaacaatatttaacaggttctctgtaaatgaaaacccaatctccgatagtggtgcc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 aattcaacaatatttaacaggttctctgtaaatgaaaacccaatctccgatagtggtgcc 507 Query: 206 cagaacatccgttggatttcagagtagattcgattgtataaacttccggttacatagtgc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 cagaacatccgttggatttcagagtagattcgattgtataaacttccggttacatagtgc 567 Query: 266 atgttagagtctgtgttgggccgtatactccctgattcactgaccttattgttcgaaaac 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 atgttagagtctgtgttgggccgtatactccctgattcactgaccttattgttcgaaaac 627 Query: 326 ttacacatcttacagcagcctcggtgtagatttaaggctcgactatatctattgaaatct 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 ttacacatcttacagcagcctcggtgtagatttaaggctcgactatatctattgaaatct 687 Query: 386 actacttacttcaattaagccgagagagagagagaacttgctttggtttctttgactgtt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 actacttacttcaattaagccgagagagagagagaacttgctttggtttctttgactgtt 747 Query: 446 tgatccactatagtgagtattattgttttattttataatatcaagtgctctgtagttcaa 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 tgatccactatagtgagtattattgttttattttataatatcaagtgctctgtagttcaa 807 Query: 506 ggttattcgtcatgagcgcactggtacggcactcaccgttgatagggttggggttccttc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ggttattcgtcatgagcgcactggtacggcactcaccgttgatagggttggggttccttc 867 Query: 566 aaagcaccgtttaccctaaaaaggtcacgtgttatttttcgacttgcatgtggaaatgtc 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 aaagcaccgtttaccctaaaaaggtcacgtgttatttttcgacttgcatgtggaaatgtc 927 Query: 626 attcgagcattggaaaagttattggtataagaacgacgtcgatgaggacaacggtaccaa 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 attcgagcattggaaaagttattggtataagaacgacgtcgatgaggacaacggtaccaa 987 Query: 686 cgagaaggatctgttcaagcggtagattgttgttacagtttggttctcgagcaagacaga 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 cgagaaggatctgttcaagcggtagattgttgttacagtttggttctcgagcaagacaga 1047 Query: 746 agcaggaagatctagactaccagcaagcaatactacgtagaaacatggcacaacatccta 805 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1048 agcaggaagatctagactaccagcaagcaata-tacgtagaaacatggcacaacatccta 1106 Query: 806 aggttatttgtcctgggtatccattattggatatccaagttgacgttacagagtcctatt 865 |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1107 aggttatttgtcttggtaatccattattggatatccaagttgacgttacagagtcctatt 1166 Query: 866 tggcaaagtaccgttttgatgagc-acgacgcaatctttgtaagaacttggttcttggtg 924 |||||||||| || ||||| |||| ||||||||||||| || |||| |||||| ||||| Sbjct: 1167 tggcaaagta-cggtttgaagagcaacgacgcaatcttggt-agaagctggttc-tggtg 1223 Query: 925 atagctaa-ttgaacatttttctaatgagatcgttnaaatggaagaatgtcaagtttgtt 983 || ||||| ||||||||||| |||||||||| | ||||||| |||||||||||||| Sbjct: 1224 at-gctaagttgaacatttt--cgatgagatcgtcgagatggaag-atgtcaagtttgtt 1279 Query: 984 gc 985 || Sbjct: 1280 gc 1281 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6766 Number of Sequences: 1807 Number of extensions: 6766 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 985 length of database: 10,358,551 effective HSP length: 16 effective length of query: 969 effective length of database: 10,329,639 effective search space: 10009420191 effective search space used: 10009420191 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)