BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZD07RM1.SCF screened BAC_end (926 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig532 1580 0.0 >3x_Contig532 Length = 2251 Score = 1580 bits (797), Expect = 0.0 Identities = 850/861 (98%), Gaps = 5/861 (0%) Strand = Plus / Plus Query: 52 agcttgagtttctcctatatcagatatggcagcagcaggaagaggcaggaagagctcgag 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25 agcttgagtttctcctatatcagatatggcagcagcaggaagaggcaggaagagctcgag 84 Query: 112 ggtttctcgctcagctaacaaagcaaccagctataaaatcgatacagacgagttagacat 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 ggtttctcgctcagctaacaaagcaaccagctataaaatcgatacagacgagttagacat 144 Query: 172 tgaagatgatgaaaaggatcaagagtaccctggaccagccaatgatgatgattatttatg 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 145 tgaagatgatgaaaaggatcaagagtaccctggaccagccaatgatgatgattacg-atg 203 Query: 232 atgacccagatgctgatatcgaaaacgagggtaaaccatctcgttccaagcgcaaggccg 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 atgacccagatgctgatatcgaaaacgagggtaaaccatctcgttccaagcgcaaggccg 263 Query: 292 cttcgagcacacctgttccagtggtactagcgacaagaggaaggccttcaaagaggaaaa 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 cttcgagcacacctgttccagtggtactagcgacaagaggaaggccttcaaagaggaaaa 323 Query: 352 gagaagaagatttgaacgatcccttaagacagaaactaccgtacccagtggacgaaaacg 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 gagaagaagatttgaacgatcccttaagacagaaactaccgtacccagtggacgaaaacg 383 Query: 412 ggtctccatacccaattgtgaatgacgagtattcattacctgaggatccagagggtgaaa 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 ggtctccatacccaattgtgaatgacgagtattcattacctgaggatccagagggtgaaa 443 Query: 472 ccaagatcaccaagaatggtgatcttctagagggaagacaatttgtagtcagaactttca 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 ccaagatcaccaagaatggtgatcttctagagggaagacaatttgtagtcagaactttca 503 Query: 532 cggtaccttccagaggtgaagttaaatacatgctttctactgagccagcccgtgccgttg 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 cggtaccttccagaggtgaagttaaatacatgctttctactgagccagcccgtgccgttg 563 Query: 592 ggttcagagactcatacttgttcttccagtaccatccaaacctatacaaattgattatct 651 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ggttcagagactcatacttgttcttccagtaccatccaaacctatacaaattgattatct 623 Query: 652 cgcaatcagagagagacgatctcatcaaaaatggtgtattgccctattcgtacagaaaca 711 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 624 cgcaatcagagagagacgatctcatcaaaaatggtgtattgccctattcgtacagaaaca 683 Query: 712 gaatcattgcgctagttactgcaaggagtgtgttccgagaattcggagccaaggttgttg 771 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 684 gaatcattgcgctagttactgcaaggagtgtgttccgagaattcggagccaaggttgttg 743 Query: 772 tagatggtaaaaacatcacggatgattattacgcccgggtagcttcgtgcatccgggaag 831 ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 744 tagatggtaaaaacatcacggatgattattacg-ccggtaagcttcgtgcatccgggaag 802 Query: 832 gtgaaagagggtacccccagc-agagaaacatcacacacaagtgtcactgggagaaatac 890 ||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 803 gtgaaagagggta-ccccagcaagagaaacatcacacacaagtgtcactggaagaaatac 861 Query: 891 ccttgg-atagacatttcgca 910 |||||| ||||||||| |||| Sbjct: 862 ccttggaatagacattccgca 882 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6171 Number of Sequences: 1807 Number of extensions: 6171 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 926 length of database: 10,358,551 effective HSP length: 16 effective length of query: 910 effective length of database: 10,329,639 effective search space: 9399971490 effective search space used: 9399971490 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)