BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZD07RM1.SCF screened BAC_end
         (926 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig532                                                         1580   0.0  

>3x_Contig532 
          Length = 2251

 Score = 1580 bits (797), Expect = 0.0
 Identities = 850/861 (98%), Gaps = 5/861 (0%)
 Strand = Plus / Plus

                                                                       
Query: 52  agcttgagtttctcctatatcagatatggcagcagcaggaagaggcaggaagagctcgag 111
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25  agcttgagtttctcctatatcagatatggcagcagcaggaagaggcaggaagagctcgag 84

                                                                       
Query: 112 ggtttctcgctcagctaacaaagcaaccagctataaaatcgatacagacgagttagacat 171
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  ggtttctcgctcagctaacaaagcaaccagctataaaatcgatacagacgagttagacat 144

                                                                       
Query: 172 tgaagatgatgaaaaggatcaagagtaccctggaccagccaatgatgatgattatttatg 231
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||
Sbjct: 145 tgaagatgatgaaaaggatcaagagtaccctggaccagccaatgatgatgattacg-atg 203

                                                                       
Query: 232 atgacccagatgctgatatcgaaaacgagggtaaaccatctcgttccaagcgcaaggccg 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atgacccagatgctgatatcgaaaacgagggtaaaccatctcgttccaagcgcaaggccg 263

                                                                       
Query: 292 cttcgagcacacctgttccagtggtactagcgacaagaggaaggccttcaaagaggaaaa 351
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttcgagcacacctgttccagtggtactagcgacaagaggaaggccttcaaagaggaaaa 323

                                                                       
Query: 352 gagaagaagatttgaacgatcccttaagacagaaactaccgtacccagtggacgaaaacg 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagaagaagatttgaacgatcccttaagacagaaactaccgtacccagtggacgaaaacg 383

                                                                       
Query: 412 ggtctccatacccaattgtgaatgacgagtattcattacctgaggatccagagggtgaaa 471
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggtctccatacccaattgtgaatgacgagtattcattacctgaggatccagagggtgaaa 443

                                                                       
Query: 472 ccaagatcaccaagaatggtgatcttctagagggaagacaatttgtagtcagaactttca 531
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccaagatcaccaagaatggtgatcttctagagggaagacaatttgtagtcagaactttca 503

                                                                       
Query: 532 cggtaccttccagaggtgaagttaaatacatgctttctactgagccagcccgtgccgttg 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cggtaccttccagaggtgaagttaaatacatgctttctactgagccagcccgtgccgttg 563

                                                                       
Query: 592 ggttcagagactcatacttgttcttccagtaccatccaaacctatacaaattgattatct 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggttcagagactcatacttgttcttccagtaccatccaaacctatacaaattgattatct 623

                                                                       
Query: 652 cgcaatcagagagagacgatctcatcaaaaatggtgtattgccctattcgtacagaaaca 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cgcaatcagagagagacgatctcatcaaaaatggtgtattgccctattcgtacagaaaca 683

                                                                       
Query: 712 gaatcattgcgctagttactgcaaggagtgtgttccgagaattcggagccaaggttgttg 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaatcattgcgctagttactgcaaggagtgtgttccgagaattcggagccaaggttgttg 743

                                                                       
Query: 772 tagatggtaaaaacatcacggatgattattacgcccgggtagcttcgtgcatccgggaag 831
           ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||
Sbjct: 744 tagatggtaaaaacatcacggatgattattacg-ccggtaagcttcgtgcatccgggaag 802

                                                                       
Query: 832 gtgaaagagggtacccccagc-agagaaacatcacacacaagtgtcactgggagaaatac 890
           ||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 803 gtgaaagagggta-ccccagcaagagaaacatcacacacaagtgtcactggaagaaatac 861

                                
Query: 891 ccttgg-atagacatttcgca 910
           |||||| ||||||||| ||||
Sbjct: 862 ccttggaatagacattccgca 882


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6171
Number of Sequences: 1807
Number of extensions: 6171
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)