BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZD09FM1.SCF screened BAC_end
         (985 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1737                                                        1548   0.0  

>3x_Contig1737 
          Length = 17214

 Score = 1548 bits (781), Expect = 0.0
 Identities = 865/889 (97%), Gaps = 3/889 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   ctgccaaagtagcgtcaccatccaagtgttggagcaattgtttgtacaacaattgggtcc 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7678 ctgccaaagtagcgtcaccatccaagtgttggagcaattgtttgtacaacaattgggtcc 7619

                                                                        
Query: 147  agatagcacctgacacagctgatccaacagctgagccgattctgtacatggtgtaactca 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7618 agatagcacctgacacagctgatccaacagctgagccgattctgtacatggtgtaactca 7559

                                                                        
Query: 207  atgcggtgacagtggccatgttttcatgagaagtgacggattggagggacacggtgactg 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7558 atgcggtgacagtggccatgttttcatgagaagtgacggattggagggacacggtgactg 7499

                                                                        
Query: 267  ggtaagtgaacatggtggtaccgagaccccaaacgactagcgcaccgatgatacctttat 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7498 ggtaagtgaacatggtggtaccgagaccccaaacgactagcgcaccgatgatacctttat 7439

                                                                        
Query: 327  cagaattttgaccggatctgaaatggaacaagatacccattgcgaccatccatagggaac 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7438 cagaattttgaccggatctgaaatggaacaagatacccattgcgaccatccatagggaac 7379

                                                                        
Query: 387  aaccagcgatgatgaatggctttaatctggtgaatctagtgatgaatagcgcaaagaaag 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7378 aaccagcgatgatgaatggctttaatctggtgaatctagtgatgaatagcgcaaagaaag 7319

                                                                        
Query: 447  gcgaaaatacggtggaagtgaaggtactgacactggaaattctggtggcagaagtgacac 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7318 gcgaaaatacggtggaagtgaaggtactgacactggaaattctggtggcagaagtgacac 7259

                                                                        
Query: 507  tttcattcacagcaaccatcaagattgtgtacaagtaacctgcggccatggtgaagatga 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7258 tttcattcacagcaaccatcaagattgtgtacaagtaacctgcggccatggtgaagatga 7199

                                                                        
Query: 567  agttgatcaagaaggcaatacacaaagcagcccaaataccacggtctctcaacaacttga 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7198 agttgatcaagaaggcaatacacaaagcagcccaaataccacggtctctcaacaacttga 7139

                                                                        
Query: 627  atggagcaattggttcacgagcccatttggattcccatgcgataaagaatgggatcaaga 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7138 atggagcaattggttcacgagcccatttggattcccatgcgataaagaatgggatcaaga 7079

                                                                        
Query: 687  cgaaacctaagatgaatggagcaatgatatgtggattgttccatttgtttgagattccac 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 7078 cgaaacctaagatgaatggagcaatgatatgtggattgttccatttgtttgagataccac 7019

                                                                        
Query: 747  ctgctagagtcaatgggaccaagatacaaccatagataataatcatgaagaaaa-accaa 805
            ||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||
Sbjct: 7018 ctgctagagtcaatgggaccaagatacaaccaaggataataatcatgaagaaaacaccaa 6959

                                                                        
Query: 806  tgacgttcaatttcc-aaacatttgaaccatactttgtacgagcccatgtgtttggtagt 864
            |||||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 6958 tgacgtccaatttccaaaacaattgaaccagactttgtacgagcccatgtgtttggtagt 6899

                                                                        
Query: 865  aagtcttttgagaagacaattctttccagccttcggtttgtctagcttctcattccatat 924
            ||||||||||||| ||||||||||||||| | |||||||||||||||   |||| |||||
Sbjct: 6898 aagtcttttgagaggacaattctttccaggcctcggtttgtctagctctccatttcatat 6839

                                                             
Query: 925  ttaccatac-acccaacaatggccaaacacttaatgtgaaaattaatgc 972
             || ||||| ||||||||||||| ||  ||| |||| |||||| |||||
Sbjct: 6838 gtagcatacaacccaacaatggcaaacaactcaatgggaaaatgaatgc 6790


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6302
Number of Sequences: 1807
Number of extensions: 6302
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 985
length of database: 10,358,551
effective HSP length: 16
effective length of query: 969
effective length of database: 10,329,639
effective search space: 10009420191
effective search space used: 10009420191
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)