BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZE08FM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1512 1140 0.0 3x_Contig849 109 1e-23 >3x_Contig1512 Length = 8803 Score = 1140 bits (575), Expect = 0.0 Identities = 578/579 (99%) Strand = Plus / Minus Query: 86 tacaaacaaagaaaattcgatgaagctattgaaaaatacaatgaagcttgggaaactcat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 tacaaacaaagaaaattcgatgaagctattgaaaaatacaatgaagcttgggaaactcat 520 Query: 146 aatgacatcacgtatctaaacaaccgtgctgcagcagaatatgaaaaaggtgattacgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 aatgacatcacgtatctaaacaaccgtgctgcagcagaatatgaaaaaggtgattacgag 460 Query: 206 gcagccatcgaaactctaacaaaggctgtggaacaaggtagagaactcagagctgattac 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 gcagccatcgaaactctaacaaaggctgtggaacaaggtagagaactcagagctgattac 400 Query: 266 aaagtcatttcaaaatctttcgctcgtatgggtaactcttaccacaagcttggcgattta 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 aaagtcatttcaaaatctttcgctcgtatgggtaactcttaccacaagcttggcgattta 340 Query: 326 aagaaggctatcgactactatgaaaaatctctaactgaacatcgtaccccagatatctta 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aagaaggctatcgactactatgaaaaatctctaactgaacatcgtaccccagatatctta 280 Query: 386 acgaaattaagaaacacagaaaaggaactcaagcaaaaggaagcagaatcttacatggac 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 acgaaattaagaaacacagaaaaggaactcaagcaaaaggaagcagaatcttacatggac 220 Query: 446 cctgaaaaggcagaagaagctagattacaaggtaaggaatacttcactaaggctgactgg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 cctgaaaaggcagaagaagctagattacaaggtaaggaatacttcactaaggctgactgg 160 Query: 506 ccaaaggctgtcgaagcatacactgaaatgatcaaaagaaatccaaacgatgccagaggt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 ccaaaggctgtcgaagcatacactgaaatgatcaaaagaaatccaaacgatgccagaggt 100 Query: 566 tactctaacagagctgcagctctatctaagttgatgtcattcgctgacgccattagagac 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99 tactctaacagagctgcagctctatctaagttgatgtcattcgctgacgccattagagac 40 Query: 626 tgtgacaaagccatcgagaaggatccaaactttgtcaga 664 |||||||||||||||||||| |||||||||||||||||| Sbjct: 39 tgtgacaaagccatcgagaaagatccaaactttgtcaga 1 >3x_Contig849 Length = 3479 Score = 109 bits (55), Expect = 1e-23 Identities = 65/67 (97%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 890 tgcatcaattttacaagaccctgtca-tgcaatctatactctcacaagctcagcaaaatc 948 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 3472 tgcatcaattttacaagaccctgtcaatgcaatctatactctcaaaagctcagcaaaatc 3413 Query: 949 ctgctgc 955 ||||||| Sbjct: 3412 ctgctgc 3406 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5973 Number of Sequences: 1807 Number of extensions: 5973 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 2 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)