BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZF01FM1.SCF screened BAC_end (883 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 1429 0.0 >3x_Contig1770 Length = 29267 Score = 1429 bits (721), Expect = 0.0 Identities = 782/797 (98%), Gaps = 4/797 (0%) Strand = Plus / Minus Query: 86 atcaattattatagaaagacgggagaaacagacagctccagaccaaaattacccgttggt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8035 atcaattattatagaaagacgggagaaacagacagctccagaccaaaattacccgttggt 7976 Query: 146 gagactcatgtattaggtgtgcaggataaatcaccattttggaattttggtttcgtcagt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7975 gagactcatgtattaggtgtgcaggataaatcaccattttggaattttggtttcgtcagt 7916 Query: 206 ccaggaaacattgttcccactttatataacaatatggtcagagcccccgttttcaaacat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7915 ccaggaaacattgttcccactttatataacaatatggtcagagcccccgttttcaaacat 7856 Query: 266 gaggtctctaagaccgatttccttctggtgaaaagtcttggtaatgggtccggtaacaga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7855 gaggtctctaagaccgatttccttctggtgaaaagtcttggtaatgggtccggtaacaga 7796 Query: 326 ttctatttgcgtcaaattaatcatctctttgctgtcggtcaaacgttcccagtggtcgaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7795 ttctatttgcgtcaaattaatcatctctttgctgtcggtcaaacgttcccagtggtcgaa 7736 Query: 386 gttcctggtccgaattctagaaaggttactgctatgggtaagaaccgtttgaggatggtt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7735 gttcctggtccgaattctagaaaggttactgctatgggtaagaaccgtttgaggatggtt 7676 Query: 446 gtgtatcgtattttgaacaaatctccggaaaacagactgttagtgaaacaggtggctcgt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7675 gtgtatcgtattttgaacaaatctccggaaaacagactgttagtgaaacaggtggctcgt 7616 Query: 506 catttcccagaacaaaatgatatgcaaaacagacaaagattaaaggaattcatgaagtat 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7615 catttcccagaacaaaatgatatgcaaaacagacaaagattaaaggaattcatgaagtat 7556 Query: 566 caacgtgaaggtgatgatcaaggtttctggaaactaaaggagggagaagttttactggat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7555 caacgtgaaggtgatgatcaaggtttctggaaactaaaggagggagaagttttactggat 7496 Query: 626 aacgaaaacgtgaagaaaatggttactcctgaagatgtttcactcgttgaatccatgtat 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7495 aacgaaaacgtgaagaaaatggttactcctgaagatgtttcactcgttgaatccatgtat 7436 Query: 686 tatggtcaacagtttcaggaagatattgatttctacaacttcgatgaaagagcttaagag 745 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 7435 tatggtcaacagttccaggaagatattgatttctacaacttcgatgaaagagctaaggag 7376 Query: 746 ttggaggagaacttaatattttgggaatgctaccaagaatttcttggatgcttcacgtat 805 |||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| || Sbjct: 7375 ttggaggagaacttaatatttt-ggaatgctaccaagaatttcttgaatgctacacagat 7317 Query: 806 gagagcatggattcaaatacctggaccctggtgattctactggttgtggtgaaggttttt 865 ||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||| |||| Sbjct: 7316 gagagcaatgattcaaatacatgga-cctggtgatcctactggttgtggtgaagg-tttt 7259 Query: 866 tcgttttttgaaaacct 882 ||| ||||||||||||| Sbjct: 7258 tcg-tttttgaaaacct 7243 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6176 Number of Sequences: 1807 Number of extensions: 6176 Number of successful extensions: 31 Number of sequences better than 1.0e-20: 1 length of query: 883 length of database: 10,358,551 effective HSP length: 16 effective length of query: 867 effective length of database: 10,329,639 effective search space: 8955797013 effective search space used: 8955797013 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)