BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZF02FM1.SCF screened BAC_end
         (948 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1620                                                        1596   0.0  

>3x_Contig1620 
          Length = 12263

 Score = 1596 bits (805), Expect = 0.0
 Identities = 852/860 (99%), Gaps = 6/860 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   aagagaaaataaaatatacgtgtcacgtgaaaacactaagaactatggaagtatatctat 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6944 aagagaaaataaaatatacgtgtcacgtgaaaacactaagaactatggaagtatatctat 7003

                                                                        
Query: 148  taaagggaagaacgaaacacgcaatgctataaatggtgtcggacagaagatcttaatcct 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7004 taaagggaagaacgaaacacgcaatgctataaatggtgtcggacagaagatcttaatcct 7063

                                                                        
Query: 208  gtagttggatacctcttgctgtgaggaaatcaaagattggcctttgtggttttttgccct 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7064 gtagttggatacctcttgctgtgaggaaatcaaagattggcctttgtggttttttgccct 7123

                                                                        
Query: 268  tttcgtcggatggagtaggatctgatggagccttttgttccaaatcttcggtaacaagtt 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7124 tttcgtcggatggagtaggatctgatggagccttttgttccaaatcttcggtaacaagtt 7183

                                                                        
Query: 328  ccactgcttgagagggttgctgtagttcttgccccttcagctgctgttgttcttggctaa 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7184 ccactgcttgagagggttgctgtagttcttgccccttcagctgctgttgttcttggctaa 7243

                                                                        
Query: 388  tattatatgaagggttgaaggtgtcgatgtacgaaaaaaaggcgttgaagacgttttcat 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7244 tattatatgaagggttgaaggtgtcgatgtacgaaaaaaaggcgttgaagacgttttcat 7303

                                                                        
Query: 448  tgacttcttcaaggtaaattttatcgtagatatgtttcatcttgaacgtatccatttcgc 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7304 tgacttcttcaaggtaaattttatcgtagatatgtttcatcttgaacgtatccatttcgc 7363

                                                                        
Query: 508  tttgatatttactgaagtcaatcggatcatatccgaattcttgtaatctagtgttgtaac 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7364 tttgatatttactgaagtcaatcggatcatatccgaattcttgtaatctagtgttgtaac 7423

                                                                        
Query: 568  catcataaaccggggcttccaataataaacctaaagcaggggcttttggaatattgattt 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7424 catcataaaccggggcttccaataataaacctaaagcaggggcttttggaatattgattt 7483

                                                                        
Query: 628  tttcttgaccgtatgcctgcctaattctttccaatggactgaaacatcttgtgatcaaag 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7484 tttcttgaccgtatgcctgcctaattctttccaatggactgaaacatcttgtgatcaaag 7543

                                                                        
Query: 688  ttgccatagatatcatcttacgaatttgatgtaacataaacgattgaccgtggattttga 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7544 ttgccatagatatcatcttacgaatttgatgtaacataaacgattgaccgtggattttga 7603

                                                                        
Query: 748  tcgatacccattccgtcttagcttcaccaataacaaacggttctgagactgtgatttgct 807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7604 tcgatacccattccgtcttagcttcaccaataacaaacggttctgagactgtgatttgct 7663

                                                                        
Query: 808  tcatgaatctcttggcgctcggatcgttgaaatcttcccccaaggtgaaa-tatggaagt 866
            |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 7664 tcatgaatctcttggcgctcggatcgttgaaatctttccccaaggtgaaattatggaagt 7723

                                                                        
Query: 867  taaaagtaccctcgtattg-nttaatgcacttctgaatctatct-aacg-tcttttgaaa 923
            |||||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||||
Sbjct: 7724 taaaagtaccctcgtattgttttaatgcacttctgaatctatctaaacgttcttttgaaa 7783

                                
Query: 924  -tctgta-gctctcttgtgt 941
             |||||| ||||||||||||
Sbjct: 7784 ttctgtaggctctcttgtgt 7803


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6769
Number of Sequences: 1807
Number of extensions: 6769
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)