BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZF03FM1.SCF screened BAC_end (964 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1648 1574 0.0 >3x_Contig1648 Length = 16375 Score = 1574 bits (794), Expect = 0.0 Identities = 866/882 (98%), Gaps = 6/882 (0%) Strand = Plus / Minus Query: 86 atatcaaggatccaaggaaggataccgtgtccagagaggtgttgagacacgatgagttcc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12022 atatcaaggatccaaggaaggataccgtgtccagagaggtgttgagacacgatgagttcc 11963 Query: 146 aggggaaggttaagttgggtagggtgagagaccacttcatctttaacgtggagagttctg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11962 aggggaaggttaagttgggtagggtgagagaccacttcatctttaacgtggagagttctg 11903 Query: 206 gtgctatgacaccggaagaaatcttcttcaaatcggtcaggatcttgaagaacaaggcgg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11902 gtgctatgacaccggaagaaatcttcttcaaatcggtcaggatcttgaagaacaaggcgg 11843 Query: 266 aatacttgaagaactgtccaatctcacaataagaagccaattcgcatgttctctatttaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11842 aatacttgaagaactgtccaatctcacaataagaagccaattcgcatgttctctatttaa 11783 Query: 326 tatcatccactcccttccatacacagacaaaccgtgcatcataattccatttctttcatt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11782 tatcatccactcccttccatacacagacaaaccgtgcatcataattccatttctttcatt 11723 Query: 386 ccctgtatcatacgcattaagccactcagtgaacagattaggcacttatatatattcata 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11722 ccctgtatcatacgcattaagccactcagtgaacagattaggcacttatatatattcata 11663 Query: 446 tataaagaagccactacatctaaactagtttaatgtacatttgtttttagattcaactgt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11662 tataaagaagccactacatctaaactagtttaatgtacatttgtttttagattcaactgt 11603 Query: 506 gttacaccatcgcatctacatttgtcggttcaaacgtctcctgatcctgcgccattggcc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11602 gttacaccatcgcatctacatttgtcggttcaaacgtctcctgatcctgcgccattggcc 11543 Query: 566 gtgctttggttataagattttcgatcatggcttttggatccacttcgagtatcaagacgt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11542 gtgctttggttataagattttcgatcatggcttttggatccacttcgagtatcaagacgt 11483 Query: 626 taccattatatccgtcactcagatcactctgggctttctgtgtataggtttcgtccgcga 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11482 taccattatatccgtcactcagatcactctgggctttctgtgtataggtttcgtccgcga 11423 Query: 686 cttcgtgatctttgaatggtgagatggatagtacagttacgaggaatagccctacttgaa 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11422 cttcgtgatctttgaatggtgagatggatagtacagttacgaggaatagccctacttgaa 11363 Query: 746 agaatagaattagcagttggtagaaaaggtacgatgcgttaccctt-aaattactcgagg 804 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 11362 agaatagaattagcagttggtagaaaaggtacgatgcgttacccttaaaattactcgagg 11303 Query: 805 gcactcgttcttcaatatactggggtgaccagtgccttctcaattccccctctattatgc 864 |||||||||| || |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 11302 gcactcgttc-tccatatactgggtgaaccagtgccttctcaattccccctctattatgc 11244 Query: 865 ctgttccatgtttaaacggcgattggtagtttttttagat-tgatattccaggc-ttttg 922 |||||||||| |||||||||||| ||||| |||| ||||| |||||| |||||| ||||| Sbjct: 11243 ctgttccatggttaaacggcgatgggtag-ttttctagatgtgatatcccaggcattttg 11185 Query: 923 aagtgctccaatttctt-ttgaagtctattggccatatgatt 963 ||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 11184 aagtgctccaaattcttctcgaagtctattggccatatgatt 11143 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6232 Number of Sequences: 1807 Number of extensions: 6232 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 964 length of database: 10,358,551 effective HSP length: 16 effective length of query: 948 effective length of database: 10,329,639 effective search space: 9792497772 effective search space used: 9792497772 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)