BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZF08FM1.SCF screened BAC_end (962 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1589 1637 0.0 >3x_Contig1589 Length = 10239 Score = 1637 bits (826), Expect = 0.0 Identities = 860/866 (99%), Gaps = 4/866 (0%) Strand = Plus / Plus Query: 88 cagctgagcgtctcatacggaccgatgaatctatatacagagaaatcgtattggaatata 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1011 cagctgagcgtctcatacggaccgatgaatctatatacagagaaatcgtattggaatata 1070 Query: 148 tgacatacttatccacattgccatttgtaatgacaagtcaggacctagtgctgattttga 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1071 tgacatacttatccacattgccatttgtaatgacaagtcaggacctagtgctgattttga 1130 Query: 208 gggatgtgtttaatttctatgtggataaatatgtgcccaaagtcaatttcaaatacgcta 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1131 gggatgtgtttaatttctatgtggataaatatgtgcccaaagtcaatttcaaatacgcta 1190 Query: 268 tggttacttcagccaaggagtcatatgacatggactatgatgtgttctacgatcctaaca 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1191 tggttacttcagccaaggagtcatatgacatggactatgatgtgttctacgatcctaaca 1250 Query: 328 acaccggtgcgcagctcatgaataagagcaggggctcagcgggaagtgaacaaaagattc 387 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 acaccggtgcgca-ctcatgaataagagcaggggctcagcgggaagtgaacaaaagattc 1309 Query: 388 aaccatttgaatccctaccgcaatgcttgcatattagcgacctttttgacgttcaattga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1310 aaccatttgaatccctaccgcaatgcttgcatattagcgacctttttgacgttcaattga 1369 Query: 448 tttttgtgatatcaaacttgttaacagtattgcaatcgaatggtggaaaccagttctctt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1370 tttttgtgatatcaaacttgttaacagtattgcaatcgaatggtggaaaccagttctctt 1429 Query: 508 tcttggcggatatgaaggtcaatgtgttctatgcttcattattaagacaccctgatataa 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1430 tcttggcggatatgaaggtcaatgtgttctatgcttcattattaagacaccctgatataa 1489 Query: 568 gattgaaaacgtcggctttatcattcttctattgtcaacttggagattcttggtactcgg 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1490 gattgaaaacgtcggctttatcattcttctattgtcaacttggagattcttggtactcgg 1549 Query: 628 aaaatagaagtgatttcggctcaaatacggatagcaacttgcccttcccgataaaactat 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1550 aaaatagaagtgatttcggctcaaatacggatagcaacttgcccttcccgataaaactat 1609 Query: 688 ggttacctactctcatatcgactttgaatgaacctgagctaccaatatttttctcccctt 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1610 ggttacctactctcatatcgactttgaatgaacctgagctaccaatatttttctcccctt 1669 Query: 748 tagaaatcctttgttctctagcaacagagttcactgtcgcacataaaccggaaaatgttg 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1670 tagaaatcctttgttctctagcaacagagttcactgtcgcacataaaccggaaaatgttg 1729 Query: 808 tgattgacacatttttcgattcgaatctattgaatggtatgatagacacttttttaagac 867 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1730 tgattgacacatttttcgattcgaatctattgaatggtatgatagacacttttttaagac 1789 Query: 868 tattgagcctggagaaaacagacaccaacaaacttcaactgcttttctga-tatctaaaa 926 ||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||| Sbjct: 1790 tattgagcctggagaaacaagacaccaacaaacttcaactgc-tttctgattatct-aaa 1847 Query: 927 gttcttttctgaaattataggtaagg 952 |||||||||||||||||||||||||| Sbjct: 1848 gttcttttctgaaattataggtaagg 1873 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6589 Number of Sequences: 1807 Number of extensions: 6589 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 962 length of database: 10,358,551 effective HSP length: 16 effective length of query: 946 effective length of database: 10,329,639 effective search space: 9771838494 effective search space used: 9771838494 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)