BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZF08FM1.SCF screened BAC_end
         (962 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1589                                                        1637   0.0  

>3x_Contig1589 
          Length = 10239

 Score = 1637 bits (826), Expect = 0.0
 Identities = 860/866 (99%), Gaps = 4/866 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   cagctgagcgtctcatacggaccgatgaatctatatacagagaaatcgtattggaatata 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 cagctgagcgtctcatacggaccgatgaatctatatacagagaaatcgtattggaatata 1070

                                                                        
Query: 148  tgacatacttatccacattgccatttgtaatgacaagtcaggacctagtgctgattttga 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 tgacatacttatccacattgccatttgtaatgacaagtcaggacctagtgctgattttga 1130

                                                                        
Query: 208  gggatgtgtttaatttctatgtggataaatatgtgcccaaagtcaatttcaaatacgcta 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 gggatgtgtttaatttctatgtggataaatatgtgcccaaagtcaatttcaaatacgcta 1190

                                                                        
Query: 268  tggttacttcagccaaggagtcatatgacatggactatgatgtgttctacgatcctaaca 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 tggttacttcagccaaggagtcatatgacatggactatgatgtgttctacgatcctaaca 1250

                                                                        
Query: 328  acaccggtgcgcagctcatgaataagagcaggggctcagcgggaagtgaacaaaagattc 387
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 acaccggtgcgca-ctcatgaataagagcaggggctcagcgggaagtgaacaaaagattc 1309

                                                                        
Query: 388  aaccatttgaatccctaccgcaatgcttgcatattagcgacctttttgacgttcaattga 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1310 aaccatttgaatccctaccgcaatgcttgcatattagcgacctttttgacgttcaattga 1369

                                                                        
Query: 448  tttttgtgatatcaaacttgttaacagtattgcaatcgaatggtggaaaccagttctctt 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1370 tttttgtgatatcaaacttgttaacagtattgcaatcgaatggtggaaaccagttctctt 1429

                                                                        
Query: 508  tcttggcggatatgaaggtcaatgtgttctatgcttcattattaagacaccctgatataa 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1430 tcttggcggatatgaaggtcaatgtgttctatgcttcattattaagacaccctgatataa 1489

                                                                        
Query: 568  gattgaaaacgtcggctttatcattcttctattgtcaacttggagattcttggtactcgg 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1490 gattgaaaacgtcggctttatcattcttctattgtcaacttggagattcttggtactcgg 1549

                                                                        
Query: 628  aaaatagaagtgatttcggctcaaatacggatagcaacttgcccttcccgataaaactat 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1550 aaaatagaagtgatttcggctcaaatacggatagcaacttgcccttcccgataaaactat 1609

                                                                        
Query: 688  ggttacctactctcatatcgactttgaatgaacctgagctaccaatatttttctcccctt 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1610 ggttacctactctcatatcgactttgaatgaacctgagctaccaatatttttctcccctt 1669

                                                                        
Query: 748  tagaaatcctttgttctctagcaacagagttcactgtcgcacataaaccggaaaatgttg 807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1670 tagaaatcctttgttctctagcaacagagttcactgtcgcacataaaccggaaaatgttg 1729

                                                                        
Query: 808  tgattgacacatttttcgattcgaatctattgaatggtatgatagacacttttttaagac 867
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1730 tgattgacacatttttcgattcgaatctattgaatggtatgatagacacttttttaagac 1789

                                                                        
Query: 868  tattgagcctggagaaaacagacaccaacaaacttcaactgcttttctga-tatctaaaa 926
            |||||||||||||||||  ||||||||||||||||||||||| ||||||| ||||| |||
Sbjct: 1790 tattgagcctggagaaacaagacaccaacaaacttcaactgc-tttctgattatct-aaa 1847

                                      
Query: 927  gttcttttctgaaattataggtaagg 952
            ||||||||||||||||||||||||||
Sbjct: 1848 gttcttttctgaaattataggtaagg 1873


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6589
Number of Sequences: 1807
Number of extensions: 6589
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 962
length of database: 10,358,551
effective HSP length: 16
effective length of query: 946
effective length of database: 10,329,639
effective search space: 9771838494
effective search space used: 9771838494
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)