BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZF10FM1.SCF screened BAC_end (881 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig806 1540 0.0 >3x_Contig806 Length = 2480 Score = 1540 bits (777), Expect = 0.0 Identities = 792/796 (99%), Gaps = 1/796 (0%) Strand = Plus / Minus Query: 86 acgaattgagaaccaagtccaaggaccaattggaacaacaattggttgaattgaagaagg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1593 acgaattgagaaccaagtccaaggaccaattggaacaacaattggttgaattgaagaagg 1534 Query: 146 aattggccgaattgaaggttcaaaaattgtccagaccatctttgccaaaaatcaacactg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1533 aattggccgaattgaaggttcaaaaattgtccagaccatctttgccaaaaatcaacactg 1474 Query: 206 tcagaaagaacattgctcgtgtcttgactgttatctctcaaaaccaaagacaagctgtca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1473 tcagaaagaacattgctcgtgtcttgactgttatctctcaaaaccaaagacaagctgtca 1414 Query: 266 gagaattgtacaagggtaagaagtaccaaccaaaggacttgagagccaagaagaccagag 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1413 gagaattgtacaagggtaagaagtaccaaccaaaggacttgagagccaagaagaccagag 1354 Query: 326 ctttgagaagagctttgaccaaattcgaagcttcccaagttactgaaaagcaaagaaaga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1353 ctttgagaagagctttgaccaaattcgaagcttcccaagttactgaaaagcaaagaaaga 1294 Query: 386 agcaaattgctttcccacaaagaaagtatgctatcaaggcttaagaaaccgttcttccta 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1293 agcaaattgctttcccacaaagaaagtatgctatcaaggcttaagaaaccgttcttccta 1234 Query: 446 ttacattattaagaacgttttttcatgttaaattagtttacatctttctacataatctct 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1233 ttacattattaagaacgttttttcatgttaaattagtttacatctttctacataatctct 1174 Query: 506 aacatcattgttgtatttgagtacacgcattttgcaaaatagacacagggtttctgttta 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 aacatcattgttgtatttgagtacacgcattttgcaaaatagacacagggtttctgttta 1114 Query: 566 atctcatgttagaatgatcctctgcatggaatcgaacgccacttgctgtgtcactttaag 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1113 atctcatgttagaatgatcctctgcatggaatcgaacgccacttgctgtgtcactttaag 1054 Query: 626 attatattgacgaaattttttacctacatacttattttagtggggtatgctattctttct 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 attatattgacgaaattttttacctacatacttattttagtggggtatgctattctttct 994 Query: 686 tcgaacgcttagattttctgaattccaagattttctccttcaactccacgttgggtataa 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 tcgaacgcttagattttctgaattccaagattttctccttcaactccacgttgggtataa 934 Query: 746 cctcctcaagtttcaatggtgatctgttgaaggggtctgttgagtcgcttagcanatgtg 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 933 cctcctcaagtttcaatggtgatctgttgaaggggtctgttgagtcgcttagcaaatgtg 874 Query: 806 ctttaatggtgcttctatcaatggtaacttttgaagtagggaggatgactgggtctttca 865 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 873 ctttaatggtgcttctatcaatggtaactttggaagtagggagaatgactgggtctttca 814 Query: 866 -gatagtatacattaa 880 ||||||||||||||| Sbjct: 813 tgatagtatacattaa 798 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6901 Number of Sequences: 1807 Number of extensions: 6901 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 881 length of database: 10,358,551 effective HSP length: 16 effective length of query: 865 effective length of database: 10,329,639 effective search space: 8935137735 effective search space used: 8935137735 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)