BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZG01RM1.SCF screened BAC_end (955 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig833 1568 0.0 >3x_Contig833 Length = 3148 Score = 1568 bits (791), Expect = 0.0 Identities = 882/905 (97%), Gaps = 7/905 (0%) Strand = Plus / Plus Query: 45 gctttggaattctgaaccgattatctgaggattgaataaaatctctggcgctctgaattt 104 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 893 gctttggaattctgaaccgattaactgaggattgaataaaatctctggcgctctgaattt 952 Query: 105 ctcattatcaagttcaatctgtttcccatctggcagtctgaacattgtttgttttccgtg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 ctcattatcaagttcaatctgtttcccatctggcagtctgaacattgtttgttttccgtg 1012 Query: 165 cattgtgtagtttttctcttcttctttcggatccaatgctatatagcacgctttctcttt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 cattgtgtagtttttctcttcttctttcggatccaatgctatatagcacgctttctcttt 1072 Query: 225 gatgattcgaacgatctctctttcgctactcgaaagcaaggaaaccccagtggactttcg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 gatgattcgaacgatctctctttcgctactcgaaagcaaggaaaccccagtggactttcg 1132 Query: 285 tataag-aacttgcaaaag-ttctgatatatcacgaccagctatatcaatccttcgtata 342 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1133 tataagcaacttgcaaaagcttctgatatatcacgaccagctatatcaatccttcgtata 1192 Query: 343 gctgatggtaatgtgtaaccatcgtaaactggaactgcgtgtgaacaaccatcaccggaa 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1193 gctgatggtaatgtgtaaccatcgtaaactggaactgcgtgtgaacaaccatcaccggaa 1252 Query: 403 tccaatacgcatcctgttgttcgcccactggcgtatagcgaaagcactgcctgaatcgat 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1253 tccaatacgcatcctgttgttcgcccactggcgtatagcgaaagcactgcctgaatcgat 1312 Query: 463 acatataccgcaggtacactaaaagtttcgaataataactcgcacatctgttctctattc 522 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1313 acatataccgcagaacaattaaaagtttcgaataataactcgcacatctgttctctattc 1372 Query: 523 tttttgggattcaatggtgcctcagtgaccaacaccggatgatcttgcaaactgctcagc 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1373 tttttgggattcaatggtgcctcagtgaccaacaccggatgatcttgcaaactgctcagc 1432 Query: 583 tgtaatcctttttcgaaaacatgcccccatagctgctccaatgcattccaatctgtcaca 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1433 tgtaatcctttttcgaaaacatgcccccatagctgctccaatgcattccaatctgtcaca 1492 Query: 643 acgccatgttctaaaggatggcgtagcttcaaaagaccccgtatttcctgtgcttggttt 702 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1493 acgccatgttctaaaggatggcgta-cttcaaaagaccccgtatttcctgtgcttggttt 1551 Query: 703 ccaacgaaagtattcccatcgaatcttccagccataactttactatatttangtatcccc 762 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1552 ccaacgaaagtattcccatcgaatcttccagccataactttactatatttaggtatcccc 1611 Query: 763 accanagaaatgttcat-acattttagtttatcttcacctccaaaccccgnctttattag 821 |||| || ||||||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 1612 accaaag-aatgttcataacatttaggtttatcttcacctccaaaccccgcctttattag 1670 Query: 822 cccagacccattgtctagaactatanngttgattgaaacatatctcatctttggaatnca 881 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||| || Sbjct: 1671 cccagacccattgtctagaactata-ggttgattgaacaatatctcatctttggaatcca 1729 Query: 882 tcaccgntatccctatgtaatgctctgaatgtcatgatcttttcgcg-tgttactgttta 940 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1730 tcaccgttatccctatgtaatgctctgaatgtcatgatcttttcgcgttgttactgttta 1789 Query: 941 caatt 945 ||||| Sbjct: 1790 caatt 1794 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6249 Number of Sequences: 1807 Number of extensions: 6249 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 955 length of database: 10,358,551 effective HSP length: 16 effective length of query: 939 effective length of database: 10,329,639 effective search space: 9699531021 effective search space used: 9699531021 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)