BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC21ZG06FM1.SCF screened BAC_end
(1048 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1775 1491 0.0
>3x_Contig1775
Length = 26320
Score = 1491 bits (752), Expect = 0.0
Identities = 817/836 (97%), Gaps = 2/836 (0%)
Strand = Plus / Minus
Query: 209 agaatttatattgagtttaagtttaatctttatatcctcgtacaagtggaaaagggagta 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25395 agaatttatattgagtttaagtttaatctttatatcctcgtacaagtggaaaagggagta 25336
Query: 269 gtctggagtgttctaattgaggaattggaattgcaggtgaaagtcgtgtatcgaaaccaa 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25335 gtctggagtgttctaattgaggaattggaattgcaggtgaaagtcgtgtatcgaaaccaa 25276
Query: 329 aaactgtgagaatagggaaacaatacgattcaatacgatacgacacgatctataaatcaa 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25275 aaactgtgagaatagggaaacaatacgattcaatacgatacgacacgatctataaatcaa 25216
Query: 389 ctgcagaaagggaattcaaaagaaaaaatatatagtgtctagtatgaagagaagtagtag 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25215 ctgcagaaagggaattcaaaagaaaaaatatatagtgtctagtatgaagagaagtagtag 25156
Query: 449 acttagacgcagggcagagccagagccagagcaagaggcaaagcaagagcaggagatcag 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25155 acttagacgcagggcagagccagagccagagcaagaggcaaagcaagagcaggagatcag 25096
Query: 509 tacgaaagtcgagacgaaagctgaagagacggcccttcccaatggtgacgtagaatcaga 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25095 tacgaaagtcgagacgaaagctgaagagacggcccttcccaatggtgacgtagaatcaga 25036
Query: 569 ttacgaaacaacggctgtgaaatgggatgactatatcgaccgaacaatcttgaaccagtt 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25035 ttacgaaacaacggctgtgaaatgggatgactatatcgaccgaacaatcttgaaccagtt 24976
Query: 629 aaataagttgcccccaatcgcgttggattttgtaccgttgcaggaattgatccagtcctg 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24975 aaataagttgcccccaatcgcgttggattttgtaccgttgcaggaattgatccagtcctg 24916
Query: 689 gtattatcagtacagtgtgatgtggttccataacgtttgtactggttactggacgctagg 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24915 gtattatcagtacagtgtgatgtggttccataacgtttgtactggttactggacgctagg 24856
Query: 749 tttcactacggggaaaccttggtggactgaaatcacgtttgatgaaagaataatgctctt 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24855 tttcactacggggaaaccttggtggactgaaatcacgtttgatgaaagaataatgctctt 24796
Query: 809 agattataatgcgggatggagtctcgaaaatgattcggtggatttggttcaatcggcaga 868
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 24795 agattataatgcgggatggagtctcgaaaatgattcgttggatttggttcaatcggagga 24736
Query: 869 tccaaatgggggcagcacggatcatgacgaagagggtcatatactgaatttatgcaagag 928
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 24735 tccaaatgggggcagcacggatcaggacgaagagggtcatatactgaatttattcaagag 24676
Query: 929 tatcttgttgaggttgatcacgtcttttatacatgatcagacggtatccttgtaaca-tg 987
|||||||||||||||||||| |||||| ||| ||| |||||||||||||| |||| ||
Sbjct: 24675 tatcttgttgaggttgatcaggtctttagaacaggataagacggtatccttgaaacattg 24616
Query: 988 ggatgaaatagtgcagtaccacattttgtatgcggaaataaac-aatctctacttt 1042
||||||||||||| ||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 24615 ggatgaaatagtgaagtaccacatttttaattcggaattaaacaaatctctacttt 24560
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6674
Number of Sequences: 1807
Number of extensions: 6674
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 1048
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1032
effective length of database: 10,329,639
effective search space: 10660187448
effective search space used: 10660187448
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)