BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZH01FM1.SCF screened BAC_end
         (947 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1563                                                        1477   0.0  

>3x_Contig1563 
          Length = 10839

 Score = 1477 bits (745), Expect = 0.0
 Identities = 846/868 (97%), Gaps = 9/868 (1%)
 Strand = Plus / Plus

                                                                        
Query: 87   ttcgaatctattaagaatatgatcattagttaacatttattcccggtaacataataaatt 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7286 ttcgaatctattaagaatatgatcattagttaacatttattcccggtaacataataaatt 7345

                                                                        
Query: 147  atatagtaataatacggtgtatggtgcgtgcgttcatgtgcgtctgtttttttggactgc 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7346 atatagtaataatacggtgtatggtgcgtgcgttcatgtgcgtctgtttttttggactgc 7405

                                                                        
Query: 207  ctctgattgaatattttcctagaggctatatatagaatcttctttttttttggctgtttc 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7406 ctctgattgaatattttcctagaggctatatatagaatcttctttttttttggctgtttc 7465

                                                                        
Query: 267  ttcttcatatgttattgtattggctgtaaatctaatcgtaacaaaaaaaaggattcgtga 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7466 ttcttcatatgttattgtattggctgtaaatctaatcgtaacaaaaaaaaggattcgtga 7525

                                                                        
Query: 327  ggtctttcgttcttagtcgaggaaagcagatataactcttgttgtcatcatttcttgttg 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7526 ggtctttcgttcttagtcgaggaaagcagatataactcttgttgtcatcatttcttgttg 7585

                                                                        
Query: 387  actaccagaattcaaacagagaatacaaccttttatttttctattatgcttcagctcgga 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7586 actaccagaattcaaacagagaatacaaccttttatttttctattatgcttcagctcgga 7645

                                                                        
Query: 447  gttatgcatacaagttcctttcccttgttacacaaaagagaaaaaagaagaattaaacac 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7646 gttatgcatacaagttcctttcccttgttacacaaaagagaaaaaagaagaattaaacac 7705

                                                                        
Query: 507  acctctccttatttcataagtcctgttgcttattgcttcaaggattcaacagcgctcaag 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7706 acctctccttatttcataagtcctgttgcttattgcttcaaggattcaacagcgctcaag 7765

                                                                        
Query: 567  atgaccgaagcataatccaagttagggtcctccaaatcaatcttggcagaagaaccagca 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7766 atgaccgaagcataatccaagttagggtcctccaaatcaatcttggcagaagaaccagca 7825

                                                                        
Query: 627  gtagcagccttaatttccttctttggtgggtgcaacttggcgtattctgccttggcttgt 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7826 gtagcagccttaatttccttctttggtgggtgcaacttggcgtattctgccttggcttgt 7885

                                                                        
Query: 687  tccactaatttcaattgagcgtgcaattgggttttgttcttcttgcttttgagcttctga 746
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 7886 tccactaatttcaattgagcgtgcaatt-ggttttgttcttcttgcttttgagcttctga 7944

                                                                        
Query: 747  cttcaaagacaagtcagtctttgaaccggggcacacacctagagctaaagcagagtatct 806
            |||||||||||||||||||||  ||||||     ||||||||||||||||||||||||||
Sbjct: 7945 cttcaaagacaagtcagtcttgaaaccggcaacaacacctagagctaaagcagagtatct 8004

                                                                        
Query: 807  caaaacgttttaagtagacataactgtgtttaatttttttttt-ctttagcttcaagac- 864
            |||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| 
Sbjct: 8005 caaaacgtttaaagtagacataactgtgtttagttttttttttcctttagcttcaagact 8064

                                                                        
Query: 865  tccaaag-antgtttaaaat-caag-attagcacaagtt-actagcattgatt-atgtca 919
            ||||||| | |||||||||| |||| || |||||||||| ||||||| ||||| ||||||
Sbjct: 8065 tccaaagaaatgtttaaaatccaagaataagcacaagttaactagcaatgattaatgtca 8124

                                        
Query: 920  tcatttaga-cttgttcctttctacgga 946
            ||||||||| ||||||||| ||||||||
Sbjct: 8125 tcatttagaccttgttcctctctacgga 8152


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,845
Number of Sequences: 1807
Number of extensions: 10845
Number of successful extensions: 149
Number of sequences better than 1.0e-20: 1
length of query: 947
length of database: 10,358,551
effective HSP length: 16
effective length of query: 931
effective length of database: 10,329,639
effective search space: 9616893909
effective search space used: 9616893909
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)