BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZH02FM1.SCF screened BAC_end
         (973 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1597                                                        1610   0.0  

>3x_Contig1597 
          Length = 14240

 Score = 1610 bits (812), Expect = 0.0
 Identities = 849/859 (98%), Gaps = 2/859 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   ttattatcgcatattttgaattcctttaaggagaactcttttgtggcttctgagccaata 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4212 ttattatcgcatattttgaattcctttaaggagaactcttttgtggcttctgagccaata 4153

                                                                        
Query: 146  aatttcaatgctctaattgaggaatttgagctacatgcagtctcagatgttggttcggaa 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4152 aatttcaatgctctaattgaggaatttgagctacatgcagtctcagatgttggttcggaa 4093

                                                                        
Query: 206  gagctcgaattattttgtgaaagtataattaccgaactcaacaataacaaaatgattgaa 265
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4092 gagctcgaattaatttgtgaaagtataattaccgaactcaacaataacaaaatgattgaa 4033

                                                                        
Query: 266  gatattaaatctggtaagaagaaaaattctattaagttccttgtcggtcaggccatgagg 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4032 gatattaaatctggtaagaagaaaaattctattaagttccttgtcggtcaggccatgagg 3973

                                                                        
Query: 326  atatctcaaggtagaatacaagctcaagaattcgaaattactttcaaaagacttcttggt 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3972 atatctcaaggtagaatacaagctcaagaattcgaaattactttcaaaagacttcttggt 3913

                                                                        
Query: 386  gttgaaccgtgattacattccttcgctaacatgtccacactatcatccatgtaaatacag 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3912 gttgaaccgtgattacattccttcgctaacatgtccacactatcatccatgtaaatacag 3853

                                                                        
Query: 446  aatagataagttcataatgaacatactacgatccaaaactattttaagattattcaaagg 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3852 aatagataagttcataatgaacatactacgatccaaaactattttaagattattcaaagg 3793

                                                                        
Query: 506  ataattcaccgaaataccttttaactacctgactaatatgaaagtatataccatttataa 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3792 ataattcaccgaaataccttttaactacctgactaatatgaaagtatataccatttataa 3733

                                                                        
Query: 566  aatttccttactataaaccttgtataccaagtgtgtagaaccattctacaaatactgaat 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3732 aatttccttactataaaccttgtataccaagtgtgtagaaccattctacaaatactgaat 3673

                                                                        
Query: 626  aaaaatattagggtacccataccattgaaaag-aaatttaggcagtcaccttcttaaggt 684
            |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 3672 aaaaatattagggtacccataccattgaaaagaaaaattaggcagtcaccttcttaaggt 3613

                                                                        
Query: 685  aattgcaacaataaacaaaatccaggtttggaagaaatgaagaaatagaaacttcaggct 744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3612 aattgcaacaataaacaaaatccaggtttggaagaaatgaagaaatagaaacttcaggct 3553

                                                                        
Query: 745  ataattagaggggaaccgaactttacatgtacagtttttcggaaagatgaaactactcat 804
            |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||
Sbjct: 3552 ataattagaggggaaccgaacttacaatgtacagtttttcggaaagatgaaactactcat 3493

                                                                        
Query: 805  gggttgtgtagttgcattagtggaatatcgcataaatttcgaaacgttgaaattctttta 864
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3492 gggttgtgtagttgcattagtggaatatcgcataaatttcgaaacgttgaaattctttaa 3433

                                                                        
Query: 865  ctccaaacgctcatgtcagaattccagatggaaacagaanaagttgttggtttgggcaga 924
            ||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||
Sbjct: 3432 ctccaaacgctcatgtcagaattccagatggaaacagaagaagtagttgg-ttgggcaga 3374

                               
Query: 925  agagtcgttattccaagtc 943
            |||||||||||||||||||
Sbjct: 3373 agagtcgttattccaagtc 3355


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7898
Number of Sequences: 1807
Number of extensions: 7898
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)