BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZH02FM1.SCF screened BAC_end (973 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1597 1610 0.0 >3x_Contig1597 Length = 14240 Score = 1610 bits (812), Expect = 0.0 Identities = 849/859 (98%), Gaps = 2/859 (0%) Strand = Plus / Minus Query: 86 ttattatcgcatattttgaattcctttaaggagaactcttttgtggcttctgagccaata 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4212 ttattatcgcatattttgaattcctttaaggagaactcttttgtggcttctgagccaata 4153 Query: 146 aatttcaatgctctaattgaggaatttgagctacatgcagtctcagatgttggttcggaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4152 aatttcaatgctctaattgaggaatttgagctacatgcagtctcagatgttggttcggaa 4093 Query: 206 gagctcgaattattttgtgaaagtataattaccgaactcaacaataacaaaatgattgaa 265 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4092 gagctcgaattaatttgtgaaagtataattaccgaactcaacaataacaaaatgattgaa 4033 Query: 266 gatattaaatctggtaagaagaaaaattctattaagttccttgtcggtcaggccatgagg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4032 gatattaaatctggtaagaagaaaaattctattaagttccttgtcggtcaggccatgagg 3973 Query: 326 atatctcaaggtagaatacaagctcaagaattcgaaattactttcaaaagacttcttggt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3972 atatctcaaggtagaatacaagctcaagaattcgaaattactttcaaaagacttcttggt 3913 Query: 386 gttgaaccgtgattacattccttcgctaacatgtccacactatcatccatgtaaatacag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3912 gttgaaccgtgattacattccttcgctaacatgtccacactatcatccatgtaaatacag 3853 Query: 446 aatagataagttcataatgaacatactacgatccaaaactattttaagattattcaaagg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3852 aatagataagttcataatgaacatactacgatccaaaactattttaagattattcaaagg 3793 Query: 506 ataattcaccgaaataccttttaactacctgactaatatgaaagtatataccatttataa 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3792 ataattcaccgaaataccttttaactacctgactaatatgaaagtatataccatttataa 3733 Query: 566 aatttccttactataaaccttgtataccaagtgtgtagaaccattctacaaatactgaat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3732 aatttccttactataaaccttgtataccaagtgtgtagaaccattctacaaatactgaat 3673 Query: 626 aaaaatattagggtacccataccattgaaaag-aaatttaggcagtcaccttcttaaggt 684 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 3672 aaaaatattagggtacccataccattgaaaagaaaaattaggcagtcaccttcttaaggt 3613 Query: 685 aattgcaacaataaacaaaatccaggtttggaagaaatgaagaaatagaaacttcaggct 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3612 aattgcaacaataaacaaaatccaggtttggaagaaatgaagaaatagaaacttcaggct 3553 Query: 745 ataattagaggggaaccgaactttacatgtacagtttttcggaaagatgaaactactcat 804 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3552 ataattagaggggaaccgaacttacaatgtacagtttttcggaaagatgaaactactcat 3493 Query: 805 gggttgtgtagttgcattagtggaatatcgcataaatttcgaaacgttgaaattctttta 864 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3492 gggttgtgtagttgcattagtggaatatcgcataaatttcgaaacgttgaaattctttaa 3433 Query: 865 ctccaaacgctcatgtcagaattccagatggaaacagaanaagttgttggtttgggcaga 924 ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| Sbjct: 3432 ctccaaacgctcatgtcagaattccagatggaaacagaagaagtagttgg-ttgggcaga 3374 Query: 925 agagtcgttattccaagtc 943 ||||||||||||||||||| Sbjct: 3373 agagtcgttattccaagtc 3355 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7898 Number of Sequences: 1807 Number of extensions: 7898 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 973 length of database: 10,358,551 effective HSP length: 16 effective length of query: 957 effective length of database: 10,329,639 effective search space: 9885464523 effective search space used: 9885464523 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)