BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZH04RM1.SCF screened BAC_end (957 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1795 1681 0.0 >3x_Contig1795 Length = 38452 Score = 1681 bits (848), Expect = 0.0 Identities = 898/907 (99%), Gaps = 6/907 (0%) Strand = Plus / Minus Query: 48 tgaacataaatcaataattaagtaatccgtccatttcagcacgttgctccggttattggt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5883 tgaacataaatcaataattaagtaatccgtccatttcagcacgttgctccggttattggt 5824 Query: 108 tcgtggaagccacttgtagaagatagtccatagttttagattaaacaagaagatgttcgt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5823 tcgtggaagccacttgtagaagatagtccatagttttagattaaacaagaagatgttcgt 5764 Query: 168 caactaaatagtttcaagtaacaacggtatatttaaactggtcaaaggatagtgttcatt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5763 caactaaatagtttcaagtaacaacggtatatttaaactggtcaaaggatagtgttcatt 5704 Query: 228 tatacttgtttgggatttctggagttggcggaatttcaccgtctaacggatactcaatct 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5703 tatacttgtttgggatttctggagttggcggaatttcaccgtctaacggatactcaatct 5644 Query: 288 taaatataacatgaccactgcctagtctcaaggcaacttgtccctcttgttgcaattgag 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5643 taaatataacatgaccactgcctagtctcaaggcaacttgtccctcttgttgcaattgag 5584 Query: 348 ggtcactcaagttgatttgtgacacacctagttcagtatctttgctaaacttgtgatgag 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5583 ggtcactcaagttgatttgtgacacacctagttcagtatctttgctaaacttgtgatgag 5524 Query: 408 caactgctccaagaacaatacttgagtcaccagtagccttgaaatcgacaacttcgttga 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5523 caactgctccaagaacaatacttgagtcaccagtagccttgaaatcgacaacttcgttga 5464 Query: 468 attggcaaactccattttcatcagccttacgttcatgagttctatgtagatgtctaattc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5463 attggcaaactccattttcatcagccttacgttcatgagttctatgtagatgtctaattc 5404 Query: 528 tcccaccttgtgccaatgagactcttacttggacagctttgcctaagttttcagcgccaa 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5403 tcccaccttgtgccaatgagactcttacttggacagctttgcctaagttttcagcgccaa 5344 Query: 588 taatggttgctttacccttgtgtgaaccaggaattgtactacgcgagaaattactagcag 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5343 taatggttgctttacccttgtgtgaaccaggaattgtactacgcgagaaattactagcag 5284 Query: 648 cagacaaactcctcttatgaattgcaccatgtggatcttggatactggaatcccccttcg 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5283 cagacaaactcctcttatgaattgcaccatgtggatcttggatactggaatcccccttcg 5224 Query: 708 cagattaccgta-gtgccgtttgagctcgaacagaagcgtacgaagtgttgggaacagat 766 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5223 caga-taccgtaggtgccgtttgagctcgaacagaagcgtacgaagtgttgggaacagat 5165 Query: 767 gggtcgaatccaaaattcgacacggaagatgagctggacgtttttccgtcattagagtcc 826 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5164 gggtcgaatccaaaattcgacacggaagatgagctggacgtttttccgtcattagagtcc 5105 Query: 827 ctgctttcttcgncatttttagatctctta-caccaaatcctttt-atagacggctaccc 884 ||||||||| || ||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 5104 ctgctttctccgccatttttagatctcttaccaccaaatccttttaatagacggctaccc 5045 Query: 885 ttagataa-ccccctgtcatagcggcaacaccagcaccagtta-cccggcaccgacttgg 942 |||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 5044 ttagataacccccctgtcatagcgccaacaccagcaccagttaccccggcaccgacttgg 4985 Query: 943 gcgacac 949 ||||||| Sbjct: 4984 gcgacac 4978 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5066 Number of Sequences: 1807 Number of extensions: 5066 Number of successful extensions: 28 Number of sequences better than 1.0e-20: 1 length of query: 957 length of database: 10,358,551 effective HSP length: 16 effective length of query: 941 effective length of database: 10,329,639 effective search space: 9720190299 effective search space used: 9720190299 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)