BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC21ZH05FM1.SCF screened BAC_end
         (968 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1771                                                        1626   0.0  

>3x_Contig1771 
          Length = 25932

 Score = 1626 bits (820), Expect = 0.0
 Identities = 876/887 (98%), Gaps = 6/887 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    tagcgtcgtatttacaacagaaaacatggcctgtagcgatagcgcaaactacaattggct 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14519 tagcgtcgtatttacaacagaaaacatggcctgtagcgatagcgcaaactacaattggct 14578

                                                                         
Query: 147   gctcaggatggcatgcaacgtgaattaacggctcatcgaatacaaactccaatattggag 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14579 gctcaggatggcatgcaacgtgaattaacggctcatcgaatacaaactccaatattggag 14638

                                                                         
Query: 207   aacttttggaggccaacacctccaaagaagcagcgcgcttctttgccttcgtatttttac 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14639 aacttttggaggccaacacctccaaagaagcagcgcgcttctttgccttcgtatttttac 14698

                                                                         
Query: 267   ccatttaatatgactcacctagtgatatactgtattgagcaatagtaatcactaggtttt 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14699 ccatttaatatgactcacctagtgatatactgtattgagcaatagtaatcactaggtttt 14758

                                                                         
Query: 327   caggctaaagaaatgatataattcgttccactccaacagtaagtcgctctcatcgctcaa 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14759 caggctaaagaaatgatataattcgttccactccaacagtaagtcgctctcatcgctcaa 14818

                                                                         
Query: 387   gtaaactctgttgtaattttttttgattttctttctattggatgaaaataaaaaccagaa 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14819 gtaaactctgttgtaattttttttgattttctttctattggatgaaaataaaaaccagaa 14878

                                                                         
Query: 447   atacatatttaaggtttgtcaacaatggaaggcgagatgggatctgtgcgttgaggagat 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14879 atacatatttaaggtttgtcaacaatggaaggcgagatgggatctgtgcgttgaggagat 14938

                                                                         
Query: 507   gttctggcgataatagattccacatgcggttgtaattctggcaattcgtcgatgatcttt 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14939 gttctggcgataatagattccacatgcggttgtaattctggcaattcgtcgatgatcttt 14998

                                                                         
Query: 567   tcagctaacgaatcgcggagcttgttgaggccgtgtatctttgcgcgttggtactggttg 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14999 tcagctaacgaatcgcggagcttgttgaggccgtgtatctttgcgcgttggtactggttg 15058

                                                                         
Query: 627   gaccgacggatcgcctctacaaactctcttgtgtacacatcggggttccttccgtcttct 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15059 gaccgacggatcgcctctacaaactctcttgtgtacacatcggggttccttccgtcttct 15118

                                                                         
Query: 687   atatactgtaaaacgtccaatggtactaggaaattctgtagttgtgactcgggatcgtta 746
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15119 atatactgtaaaacgtccaatggtactaggaaattctgtagttgtgactcgggatcgtta 15178

                                                                         
Query: 747   gcttgttgattcaattgtttcatacggtcaacattacgttgcatgttggntaccatacct 806
             |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 15179 gcttgttgattcaattgtttcatacggtcaacattacgttgcatgttggtaaccatacct 15238

                                                                         
Query: 807   tgcattgaatcttcagttcctgggaaaatcat-aacataaacaccaagctcaatgaatga 865
             |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 15239 tgcattgaatcttcagttcctggg-aaatcataaacataaacaccaagctcaatgaatga 15297

                                                                         
Query: 866   gtcaattatcgcagctaggcgttgttctgtctcaacc-aatcggtttgc-atttctttaa 923
             ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||
Sbjct: 15298 gtcaattatcgcagctaggcgttgttctgtctcaaccaaatcggtttgcaatttctctaa 15357

                                                            
Query: 924   g-tttgctctaccatttcgtccgtatatcttggga-tactctgtaag 968
             | ||||||||||||| |||||||||||||| |||| |||||||||||
Sbjct: 15358 gttttgctctaccatctcgtccgtatatctcgggattactctgtaag 15404


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6273
Number of Sequences: 1807
Number of extensions: 6273
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 968
length of database: 10,358,551
effective HSP length: 16
effective length of query: 952
effective length of database: 10,329,639
effective search space: 9833816328
effective search space used: 9833816328
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)