BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC21ZH07FM1.SCF screened BAC_end (964 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1214 1588 0.0 >3x_Contig1214 Length = 6334 Score = 1588 bits (801), Expect = 0.0 Identities = 866/882 (98%), Gaps = 5/882 (0%) Strand = Plus / Plus Query: 88 gtttgttgctgcaggcgtacgagtaaaatgccatccaacataatggccctaaacaggcaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1635 gtttgttgctgcaggcgtacgagtaaaatgccatccaacataatggccctaaacaggcaa 1694 Query: 148 ctattaggttcataaattgccaaatggcaaactcagcatccgatgaaccgattcccatgg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1695 ctattaggttcataaattgccaaatggcaaactcagcatccgatgaaccgattcccatgg 1754 Query: 208 tcgatctgaagagtaatccgaataccgagagaaaattcgaatacgcaatattccaaagta 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1755 tcgatctgaagagtaatccgaataccgagagaaaattcgaatacgcaatattccaaagta 1814 Query: 268 cccaagcaacacagaatttgaatgcttctctgtaatccaataaatccataaaaatttctt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1815 cccaagcaacacagaatttgaatgcttctctgtaatccaataaatccataaaaatttctt 1874 Query: 328 tgaatctaaccaatggcattattatcaaatctctcacacctttattctggaattcttttc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1875 tgaatctaaccaatggcattattatcaaatctctcacacctttattctggaattcttttc 1934 Query: 388 ctttcaagctcggtattaggtttgcacatataattgatataaatgtagtgacgaatcctg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1935 ctttcaagctcggtattaggtttgcacatataattgatataaatgtagtgacgaatcctg 1994 Query: 448 caacagtcactgccaatagaaagtccttgtttgaaggatgagaagatgcatgggtaataa 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1995 caacagtcactgccaatagaaagtccttgtttgaaggatgagaagatgcatgggtaataa 2054 Query: 508 taactccaactaaagaagcgataattcccccaatatttccaacaacaagaccccaggtgc 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2055 taactccaactaaagaagcgataattcccccaatatttccaacaacaagaccccaggtgc 2114 Query: 568 tgacgttaacacctcgcaacatgaccccaccttgttttgaattgtgctcatcttgtaaag 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2115 tgacgttaacacctcgcaacatgaccccaccttgttttgaattgtgctcatcttgtaaag 2174 Query: 628 caagttttcttgcattcataaagacaggaatgtatgagctntcagtgatttggtatattg 687 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 2175 caagttttcttgcattcataaagacagggatgtatgagctttcagtgatttggtatattg 2234 Query: 688 taccaaagcaaagcataagacaatacaacactgattgctggactaaggtttgatattttt 747 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2235 ttccaaagcaaagcataagacaatacaacactgattgctggactaaggtttgatattttt 2294 Query: 748 tagtatcggataaccagtagaatggaatagcanagataccatacgatgccgttgcgccaa 807 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2295 tagtatcggataaccagtagaatggaatagcaaagataccatacgatgccgttgcgccaa 2354 Query: 808 tcattagccattttctatagtcccgataatcagcgaaggccatcattaaaa-tgcaatcg 866 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 2355 tcattagccattttctatagtccgaataatcagcgaaggccatcattaaaattgcaatcg 2414 Query: 867 caccttct-aagacgtat-aatggccttttagtagaaag-aaaagaagtgtattgaactg 923 |||||||| ||||||||| |||||||||| |||||| || |||||| ||||||||||||| Sbjct: 2415 caccttctaaagacgtataaatggcctttaagtagagagaaaaagacgtgtattgaactg 2474 Query: 924 ttccgttactaaaagt-acataacagtcgtnccctgtggcta 964 |||||| ||||||||| ||||||||||||| ||||||||||| Sbjct: 2475 ttccgtaactaaaagtaacataacagtcgtcccctgtggcta 2516 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6427 Number of Sequences: 1807 Number of extensions: 6427 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 964 length of database: 10,358,551 effective HSP length: 16 effective length of query: 948 effective length of database: 10,329,639 effective search space: 9792497772 effective search space used: 9792497772 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)