BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZA05RM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1421 1641 0.0 >3x_Contig1421 Length = 8026 Score = 1641 bits (828), Expect = 0.0 Identities = 901/917 (98%), Gaps = 8/917 (0%) Strand = Plus / Minus Query: 48 ttgttagatggaagtattgaaatgtagcctttgatctctagagagaagtgatatgaacca 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2202 ttgttagatggaagtattgaaatgtagcctttgatctctagagagaagtgatatgaacca 2143 Query: 108 tcaaatcaggtaacataggccaaataatccttgagccacaccgaacttttgtcattttac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2142 tcaaatcaggtaacataggccaaataatccttgagccacaccgaacttttgtcattttac 2083 Query: 168 gttctatcattgtttttatataaaaatgttacaatctaaacaaaaaataaagaaaagaca 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2082 gttctatcattgtttttatataaaaatgttacaatctaaacaaaaaataaagaaaagaca 2023 Query: 228 ggacttaaaaaaaaaaattccatttgactgaaaaacgcttatcagatatctgataataat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2022 ggacttaaaaaaaaaaattccatttgactgaaaaacgcttatcagatatctgataataat 1963 Query: 288 tagtattgacaatggaattttacatgcacaacctctcgaaactgcgcagaaggcgctagc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1962 tagtattgacaatggaattttacatgcacaacctctcgaaactgcgcagaagacgctagc 1903 Query: 348 aaattaatttgtcacttcccaaacaccccgtagctgcatatagatgtaggacatatgatt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1902 aaattaatttgtcacttcccaaacaccccgtagctgcatatagatgtaggacatatgatt 1843 Query: 408 atgaggtggaatttggtagccgtaggtgtattgtatatcaacaaacttgagtaataaatg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1842 atgaggtggaatttggtagccgtaggtgtattgtatatcaacaaacttgagtaataaatg 1783 Query: 468 tatcaattaatgaaggaataagtatatgcttgtttgagcctgacttattgagaatgcaag 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1782 tatcaattaatgaaggaataagtatatgcttgtttgagcctgacttattgagaatgcaag 1723 Query: 528 agcttagatgaggagatgaggagatgaggagatgagagatgagactatcgaagcggagca 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1722 agcttagatgaggagatgaggagatgaggagatgagagatgagactatcgaagcggagca 1663 Query: 588 acaatgttactcagcacgtatgtatttagaatacggttaaaataacgaaacatctcatta 647 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1662 acaatgttactcagcacgtatgtatttagaatacggggaaaataacgaaacatctcatta 1603 Query: 648 tgatgagggaggccgattccatcataacggtattatggtgcaaagaaagttagatcaaga 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1602 tgatgagggaggccgattccatcataacggtattatggtgcaaagaaagttagatcaaga 1543 Query: 708 atagaaataaacagaaagcattgagaacttagtaacggcgggagaaagttcaacttcaat 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1542 atagaaataaacagaaagcattgagaacttagtaacggcgggagaaagttcaacttcaat 1483 Query: 768 gaagaaaaaacagggggaagaggggaaatcatttgatgaatcagactgatttctac--aa 825 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 1482 gaagaaaaaaca-ggggaagaggggaaatcatttgatgaatcagactga-ttctacaaaa 1425 Query: 826 aattatcaccacagtcttcanagatttagtc-agatatggaaacaaagatccgattgana 884 |||||||||||||||||||| ||| | |||| |||||||||||||||||||||||||| | Sbjct: 1424 aattatcaccacagtcttcagaga-taagtcaagatatggaaacaaagatccgattgaaa 1366 Query: 885 aagtagtcactcatcattgataaaaataatccattagcg-tgcgataaggatg-atacac 942 |||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||| Sbjct: 1365 aagtagtcactcatcattgataaaaataatccataagcgttgcgataaggatgaatacac 1306 Query: 943 ttccctatcgtgataga 959 | ||||||||||||||| Sbjct: 1305 tcccctatcgtgataga 1289 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,968 Number of Sequences: 1807 Number of extensions: 12968 Number of successful extensions: 100 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)