BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZA06FM1.SCF screened BAC_end
         (967 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1500                                                        1657   0.0  

>3x_Contig1500 
          Length = 9720

 Score = 1657 bits (836), Expect = 0.0
 Identities = 874/883 (98%), Gaps = 3/883 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   cgaatatccgttcaattcgaacaagaaccatggtatagtcaacagaaccatcactgggat 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9508 cgaatatccgttcaattcgaacaagaaccatggtatagtcaacagaaccatcactgggat 9449

                                                                        
Query: 146  ggcactgaatgcctgtttcatttccaacgacatctggttcttcaaataacggggatgatt 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9448 ggcactgaatgcctgtttcatttccaacgacatctggttcttcaaataacggggatgatt 9389

                                                                        
Query: 206  gaaaacagccttattaaaaacgaaaaggtacgacatcgtagcgacactgaagtacaaagc 265
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9388 gaaaacagccttatcaaaaacgaaaaggtacgacatcgtagcgacactgaagtacaaagc 9329

                                                                        
Query: 266  ccatccaaaaattgtcatcaagacaaacatcgttagcgtttctctaaacaaattataacg 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9328 ccatccaaaaattgtcatcaagacaaacatcgttagcgtttctctaaacaaattataacg 9269

                                                                        
Query: 326  agggaaaattgattggaacgtataatcagtgaattccaacaagaatggttcataaccgta 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268 agggaaaattgattggaacgtataatcagtgaattccaacaagaatggttcataaccgta 9209

                                                                        
Query: 386  cacatcaccagctggcttggctgcagtgccgtttaaatttcctgtgttcaagtccaaaaa 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9208 cacatcaccagctggcttggctgcagtgccgtttaaatttcctgtgttcaagtccaaaaa 9149

                                                                        
Query: 446  ctgaccaacactattggtaacactgctgggtagcatattcacagggaatactttcccata 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9148 ctgaccaacactattggtaacactgctgggtagcatattcacagggaatactttcccata 9089

                                                                        
Query: 506  aacgtaatccaacagatacgtatcacaaacttccaataataaatccatggtgtgtattcg 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9088 aacgtaatccaacagatacgtatcacaaacttccaataataaatccatggtgtgtattcg 9029

                                                                        
Query: 566  aatatatgtatatcagcttgggattctccctctactgtgttttgcttctatatgccgact 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9028 aatatatgtatatcagcttgggattctccctctactgtgttttgcttctatatgccgact 8969

                                                                        
Query: 626  tattcctgctgcttttacgatctgaatctagcaactaaatcaaactggctaactcatcgc 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8968 tattcctgctgcttttacgatctgaatctagcaactaaatcaaactggctaactcatcgc 8909

                                                                        
Query: 686  cttatatacatatattatttatatatcagtgtgtatagaaaatatcacgatttcattttt 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8908 cttatatacatatattatttatatatcagtgtgtatagaaaatatcacgatttcattttt 8849

                                                                        
Query: 746  aacttttttttcacgaagttaaccaaatttgaacgat-aaaaacccgagttttaacgata 804
            ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 8848 aacttttttttcacgaagttaaccaaa-ttgaacgataaaaaacccgagttttaacgata 8790

                                                                        
Query: 805  gaatgcgaagagtatcgagcctcatcggtccatttcttcaataagcattggcttgcgaaa 864
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8789 gaatgcgaagagtatcgagcctcatcggtccatttcttcaataagcattggcttgcgaaa 8730

                                                                        
Query: 865  ccaagccgttcataccgttatcacagctagtctatacgactagctcttttctttctaaag 924
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 8729 ccaagccgttcataccgttatcacagctagtctatacgactagctcttttc-ttctagag 8671

                                                       
Query: 925  tgttnacggcgtacttttcgcaagtgtgggcctgtttttctgt 967
            |||| ||||||||||||||||||||   |||||||||||||||
Sbjct: 8670 tgtttacggcgtacttttcgcaagttgtggcctgtttttctgt 8628


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7322
Number of Sequences: 1807
Number of extensions: 7322
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)