BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZA06RM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1603 1564 0.0 >3x_Contig1603 Length = 12146 Score = 1564 bits (789), Expect = 0.0 Identities = 900/919 (97%), Gaps = 14/919 (1%) Strand = Plus / Plus Query: 48 gcagtggcatcatttcttggtt-aatggaaattcctatgattaactgcgaaatattgtga 106 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 199 gcagtggcatcatttcttggttcaatggaaattcctatgattaactgcgaaatattgtga 258 Query: 107 tttgcgttggcaccattgaggtcatctgtcattacatcgtcttccatatcaatttcacct 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 tttgcgttggcaccattgaggtcatctgtcattacatcgtcttccatatcaatttcacct 318 Query: 167 aatccatctgaagggttagctgtcacaccattcccaacattggcctgtgttatttttacc 226 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 319 aatccatctgaagggttagctgtcacaccattcccaacattggcctgtggaagttttacc 378 Query: 227 ttaaaaattgcactcggtttctcattacccaagtatccaaataatttgaagtcctccgct 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 ttaaaaattgcactcggtttctcattacccaagtatccaaataatttgaagtcctccgct 438 Query: 287 ggatttagtttaaaatacactgtcgcaaggaattcctgagggaatgttacgtttggtagt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 ggatttagtttaaaatacactgtcgcaaggaattcctgagggaatgttacgtttggtagt 498 Query: 347 ataaacaaagtgatatgtgagtatgattttggctttgttgatgataatactattgtatgc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 ataaacaaagtgatatgtgagtatgattttggctttgttgatgataatactattgtatgc 558 Query: 407 tgcaaaccattagaattaggtacttcagtggataattgtaaggggttcccggaggcgatg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 tgcaaaccattagaattaggtacttcagtggataattgtaaggggttcccggaggcgatg 618 Query: 467 gcagcaaacattttacaattcctgtttgctgtactttgtcagagtgtgagtagataggag 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 gcagcaaacattttacaattcctgtttgctgtactttgtcagagtgtgagtagataggag 678 Query: 527 taccattttcttggaacagaaagccgtcctacaaaggttgtgtgtgttttcccaacttct 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 taccattttcttggaacagaaagccgtcctacaaaggttgtgtgtgttttcccaacttct 738 Query: 587 tttatgtatgtatcctttatattacttgaactttatatcattttcttgcttattcgagaa 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 tttatgtatgtatcctttatattacttgaactttatatcattttcttgcttattcgagaa 798 Query: 647 atttcctaaccttcacgcacatgaaccccgagagatagaaaattgctatatacatgaata 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 atttcctaaccttcacgcacatgaaccccgagagatagaaaattgctatatacatgaata 858 Query: 707 gtaactatttaatatgtagtatttatattaacgcgatttgatcagcgttaatgcgttacc 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 859 gtaactatttaatatgtagtatttatattaacgcgatttgatcagcgttaatgcgttacc 918 Query: 767 aattcttctgttagattcatctgggtgt-agaatctt-accaagacggnaagttt-acgc 823 |||||||||||||||||||||| ||||| |||||||| |||||||||| |||||| |||| Sbjct: 919 aattcttctgttagattcatct-ggtgtaagaatcttcaccaagacgggaagtttaacgc 977 Query: 824 aaggcatttgagccgac-agagc-aatctaacactttcgaaaat-agtttctttggtacg 880 |||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 978 aaggca-ttgagccgacaagagcaaatctaacactttcgaaaataagtttctttggtacg 1036 Query: 881 gataattctt-cactgcagttttgatgagggtctgaga-gttagattctgana-tttatc 937 |||||||||| ||||||||||||||||| ||||||||| |||||||||||| | |||||| Sbjct: 1037 gataattcttccactgcagttttgatga-ggtctgagatgttagattctgagattttatc 1095 Query: 938 tttca-gaatgatagtacc 955 ||||| ||||||||||||| Sbjct: 1096 tttcaggaatgatagtacc 1114 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6687 Number of Sequences: 1807 Number of extensions: 6687 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)