BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZA06RM1.SCF screened BAC_end
         (958 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1603                                                        1564   0.0  

>3x_Contig1603 
          Length = 12146

 Score = 1564 bits (789), Expect = 0.0
 Identities = 900/919 (97%), Gaps = 14/919 (1%)
 Strand = Plus / Plus

                                                                        
Query: 48   gcagtggcatcatttcttggtt-aatggaaattcctatgattaactgcgaaatattgtga 106
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 199  gcagtggcatcatttcttggttcaatggaaattcctatgattaactgcgaaatattgtga 258

                                                                        
Query: 107  tttgcgttggcaccattgaggtcatctgtcattacatcgtcttccatatcaatttcacct 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259  tttgcgttggcaccattgaggtcatctgtcattacatcgtcttccatatcaatttcacct 318

                                                                        
Query: 167  aatccatctgaagggttagctgtcacaccattcccaacattggcctgtgttatttttacc 226
            |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||
Sbjct: 319  aatccatctgaagggttagctgtcacaccattcccaacattggcctgtggaagttttacc 378

                                                                        
Query: 227  ttaaaaattgcactcggtttctcattacccaagtatccaaataatttgaagtcctccgct 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379  ttaaaaattgcactcggtttctcattacccaagtatccaaataatttgaagtcctccgct 438

                                                                        
Query: 287  ggatttagtttaaaatacactgtcgcaaggaattcctgagggaatgttacgtttggtagt 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439  ggatttagtttaaaatacactgtcgcaaggaattcctgagggaatgttacgtttggtagt 498

                                                                        
Query: 347  ataaacaaagtgatatgtgagtatgattttggctttgttgatgataatactattgtatgc 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499  ataaacaaagtgatatgtgagtatgattttggctttgttgatgataatactattgtatgc 558

                                                                        
Query: 407  tgcaaaccattagaattaggtacttcagtggataattgtaaggggttcccggaggcgatg 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559  tgcaaaccattagaattaggtacttcagtggataattgtaaggggttcccggaggcgatg 618

                                                                        
Query: 467  gcagcaaacattttacaattcctgtttgctgtactttgtcagagtgtgagtagataggag 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619  gcagcaaacattttacaattcctgtttgctgtactttgtcagagtgtgagtagataggag 678

                                                                        
Query: 527  taccattttcttggaacagaaagccgtcctacaaaggttgtgtgtgttttcccaacttct 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679  taccattttcttggaacagaaagccgtcctacaaaggttgtgtgtgttttcccaacttct 738

                                                                        
Query: 587  tttatgtatgtatcctttatattacttgaactttatatcattttcttgcttattcgagaa 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739  tttatgtatgtatcctttatattacttgaactttatatcattttcttgcttattcgagaa 798

                                                                        
Query: 647  atttcctaaccttcacgcacatgaaccccgagagatagaaaattgctatatacatgaata 706
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799  atttcctaaccttcacgcacatgaaccccgagagatagaaaattgctatatacatgaata 858

                                                                        
Query: 707  gtaactatttaatatgtagtatttatattaacgcgatttgatcagcgttaatgcgttacc 766
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859  gtaactatttaatatgtagtatttatattaacgcgatttgatcagcgttaatgcgttacc 918

                                                                        
Query: 767  aattcttctgttagattcatctgggtgt-agaatctt-accaagacggnaagttt-acgc 823
            |||||||||||||||||||||| ||||| |||||||| |||||||||| |||||| ||||
Sbjct: 919  aattcttctgttagattcatct-ggtgtaagaatcttcaccaagacgggaagtttaacgc 977

                                                                        
Query: 824  aaggcatttgagccgac-agagc-aatctaacactttcgaaaat-agtttctttggtacg 880
            |||||| |||||||||| ||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 978  aaggca-ttgagccgacaagagcaaatctaacactttcgaaaataagtttctttggtacg 1036

                                                                        
Query: 881  gataattctt-cactgcagttttgatgagggtctgaga-gttagattctgana-tttatc 937
            |||||||||| ||||||||||||||||| ||||||||| |||||||||||| | ||||||
Sbjct: 1037 gataattcttccactgcagttttgatga-ggtctgagatgttagattctgagattttatc 1095

                               
Query: 938  tttca-gaatgatagtacc 955
            ||||| |||||||||||||
Sbjct: 1096 tttcaggaatgatagtacc 1114


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6687
Number of Sequences: 1807
Number of extensions: 6687
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 958
length of database: 10,358,551
effective HSP length: 16
effective length of query: 942
effective length of database: 10,329,639
effective search space: 9730519938
effective search space used: 9730519938
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)