BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZA07FM1.SCF screened BAC_end (1045 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1295 844 0.0 >3x_Contig1295 Length = 7117 Score = 844 bits (426), Expect = 0.0 Identities = 466/479 (97%), Gaps = 1/479 (0%) Strand = Plus / Plus Query: 86 atcagctgtcattactttctgctcggtcagcattgatgaaaacccggctcatatctcatt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 atcagctgtcattactttctgctcggtcagcattgatgaaaacccggctcatatctcatt 945 Query: 146 aacttcgcctcgctcctaatgtaaagatatatacctaagaaataataaggaatgataagt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 aacttcgcctcgctcctaatgtaaagatatatacctaagaaataataaggaatgataagt 1005 Query: 206 gaatctatccaatattcctggtccaactattcttcaacctagttttctttcactgtgtga 265 |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 gaatctatccaaaaa-cctggtccaactattcttcaacctagttttctttcactgtgtga 1064 Query: 266 gtcacactattataccaaatacccatatgtaagttacatcttttttcagtgtcactatca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1065 gtcacactattataccaaatacccatatgtaagttacatcttttttcagtgtcactatca 1124 Query: 326 aaactcctgtattgttatccataaactttagaaatacagtacagtgcgtatcccgatgta 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1125 aaactcctgtattgttatccataaactttagaaatacagtacagtgcgtatcccgatgta 1184 Query: 386 gacagaatttccggtactctacctccaacttaatgccatatgcctgcgtatcgtgacgct 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1185 gacagaatttccggtactctacctccaacttaatgccatatgcctgcgtatcgtgacgct 1244 Query: 446 ttctaccgaaatgaatttcgggataatagctacatacatatatacatctcatatcttaca 505 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1245 ttcgaccgaaatgaatttcgggataatagctacatacatatatacatctcatatcttcca 1304 Query: 506 ccgaacaaggatgtagattgggaactcccagnncgtcactcggactttttnattcatgt 564 |||||||||| || |||||| ||||||||| ||||||||||||||||| || ||||| Sbjct: 1305 ccgaacaaggttggagattgttaactcccagttcgtcactcggacttttttatgcatgt 1363 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5934 Number of Sequences: 1807 Number of extensions: 5934 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 1045 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1029 effective length of database: 10,329,639 effective search space: 10629198531 effective search space used: 10629198531 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)