BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZB05FM1.SCF screened BAC_end
         (922 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1640                                                        1546   0.0  

>3x_Contig1640 
          Length = 15521

 Score = 1546 bits (780), Expect = 0.0
 Identities = 825/837 (98%), Gaps = 3/837 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    cggcatacttatgacattatctaccagagaccggacaacataataggcatacaatctgat 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13399 cggcatacttatgacattatctaccagagaccggacaacataataggcatacaatctgat 13458

                                                                         
Query: 147   gaccaaaaacgcttcctattggccagtaagctcattaaagcgtctgtctctattcttatc 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13459 gaccaaaaacgcttcctattggccagtaagctcattaaagcgtctgtctctattcttatc 13518

                                                                         
Query: 207   tggcgtctaattgatgtagtggtttccccttgtctctgattcgtgactcaagatagggca 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13519 tggcgtctaattgatgtagtggtttccccttgtctctgattcgtgactcaagatagggca 13578

                                                                         
Query: 267   gacagccacatagaagcaatcaataaccgaccgatgcttcgctgtcctagtattattcaa 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13579 gacagccacatagaagcaatcaataaccgaccgatgcttcgctgtcctagtattattcaa 13638

                                                                         
Query: 327   tagggattggcgtagaaaatcgcacggaagcagcagcgaaaaaaagcctttcattttacg 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13639 tagggattggcgtagaaaatcgcacggaagcagcagcgaaaaaaagcctttcattttacg 13698

                                                                         
Query: 387   tagtttttctggcgtttttttgttgtgaatttgacctttttatttacttgtcttgtgttt 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13699 tagtttttctggcgtttttttgttgtgaatttgacctttttatttacttgtcttgtgttt 13758

                                                                         
Query: 447   ttttctcaacgttcctctgccacagagaagcaggttggaatttcaacctttcaaatattt 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13759 ttttctcaacgttcctctgccacagagaagcaggttggaatttcaacctttcaaatattt 13818

                                                                         
Query: 507   agaccagtttgaaacattcttccggggtttctctatggcttctatttcattcatttatct 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13819 agaccagtttgaaacattcttccggggtttctctatggcttctatttcattcatttatct 13878

                                                                         
Query: 567   gttatcctcaagtatatataaatatgggatgtacatgccatgggcaatttaagacgaaat 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13879 gttatcctcaagtatatataaatatgggatgtacatgccatgggcaatttaagacgaaat 13938

                                                                         
Query: 627   catctaaccggtaaacgactggtgtttttttttttggttgatggtttcctttaaatatac 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 13939 catctaaccggtaaacgactggtgtttttttttttggttgatggtttccttaaattatac 13998

                                                                         
Query: 687   aaatccagagataatcatatctaattaaccgctgtctgctctgctttcactgctttcgca 746
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13999 aaatccagagataatcatatctaattaaccgctgtctgctctgctttcactgctttcgca 14058

                                                                         
Query: 747   tcaccgntttcttctttttaccttttttaaaaaataaagatcttactggtactgctacgc 806
             |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 14059 tcaccgttttcttctttttaccttttttaagaaataaagatcttactggtactgctacgc 14118

                                                                         
Query: 807   taggtcatnncacttgtgattaaat-acattgacatta-aaaacttctttattttctaat 864
             ||||||||  ||||||||||| ||| |||||||||||| |||||||||||||||||||||
Sbjct: 14119 taggtcat-ccacttgtgatttaataacattgacattagaaaacttctttattttctaat 14177

                                                                      
Query: 865   atttactggcacatattaccgctattattattatttgaanaaaaagttacttttttt 921
             ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||
Sbjct: 14178 atttactggcacatattaccgctattattattatttgagagaaaagttacttttttt 14234


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,668
Number of Sequences: 1807
Number of extensions: 12668
Number of successful extensions: 88
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)