BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZB05FM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1640 1546 0.0 >3x_Contig1640 Length = 15521 Score = 1546 bits (780), Expect = 0.0 Identities = 825/837 (98%), Gaps = 3/837 (0%) Strand = Plus / Plus Query: 87 cggcatacttatgacattatctaccagagaccggacaacataataggcatacaatctgat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13399 cggcatacttatgacattatctaccagagaccggacaacataataggcatacaatctgat 13458 Query: 147 gaccaaaaacgcttcctattggccagtaagctcattaaagcgtctgtctctattcttatc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13459 gaccaaaaacgcttcctattggccagtaagctcattaaagcgtctgtctctattcttatc 13518 Query: 207 tggcgtctaattgatgtagtggtttccccttgtctctgattcgtgactcaagatagggca 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13519 tggcgtctaattgatgtagtggtttccccttgtctctgattcgtgactcaagatagggca 13578 Query: 267 gacagccacatagaagcaatcaataaccgaccgatgcttcgctgtcctagtattattcaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13579 gacagccacatagaagcaatcaataaccgaccgatgcttcgctgtcctagtattattcaa 13638 Query: 327 tagggattggcgtagaaaatcgcacggaagcagcagcgaaaaaaagcctttcattttacg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13639 tagggattggcgtagaaaatcgcacggaagcagcagcgaaaaaaagcctttcattttacg 13698 Query: 387 tagtttttctggcgtttttttgttgtgaatttgacctttttatttacttgtcttgtgttt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13699 tagtttttctggcgtttttttgttgtgaatttgacctttttatttacttgtcttgtgttt 13758 Query: 447 ttttctcaacgttcctctgccacagagaagcaggttggaatttcaacctttcaaatattt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13759 ttttctcaacgttcctctgccacagagaagcaggttggaatttcaacctttcaaatattt 13818 Query: 507 agaccagtttgaaacattcttccggggtttctctatggcttctatttcattcatttatct 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13819 agaccagtttgaaacattcttccggggtttctctatggcttctatttcattcatttatct 13878 Query: 567 gttatcctcaagtatatataaatatgggatgtacatgccatgggcaatttaagacgaaat 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13879 gttatcctcaagtatatataaatatgggatgtacatgccatgggcaatttaagacgaaat 13938 Query: 627 catctaaccggtaaacgactggtgtttttttttttggttgatggtttcctttaaatatac 686 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 13939 catctaaccggtaaacgactggtgtttttttttttggttgatggtttccttaaattatac 13998 Query: 687 aaatccagagataatcatatctaattaaccgctgtctgctctgctttcactgctttcgca 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13999 aaatccagagataatcatatctaattaaccgctgtctgctctgctttcactgctttcgca 14058 Query: 747 tcaccgntttcttctttttaccttttttaaaaaataaagatcttactggtactgctacgc 806 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 14059 tcaccgttttcttctttttaccttttttaagaaataaagatcttactggtactgctacgc 14118 Query: 807 taggtcatnncacttgtgattaaat-acattgacatta-aaaacttctttattttctaat 864 |||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||| Sbjct: 14119 taggtcat-ccacttgtgatttaataacattgacattagaaaacttctttattttctaat 14177 Query: 865 atttactggcacatattaccgctattattattatttgaanaaaaagttacttttttt 921 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 14178 atttactggcacatattaccgctattattattatttgagagaaaagttacttttttt 14234 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,668 Number of Sequences: 1807 Number of extensions: 12668 Number of successful extensions: 88 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)