BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZB09FM1.SCF screened BAC_end (972 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig776 1552 0.0 >3x_Contig776 Length = 3521 Score = 1552 bits (783), Expect = 0.0 Identities = 859/879 (97%), Gaps = 6/879 (0%) Strand = Plus / Plus Query: 87 gcaatgttcccgtttaaatcgttttgaacaacgacaaaagcagcatttcccaaaagatcg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2594 gcaatgttcccgtttaaatcgttttgaacaacgacaaaagcagcatttcccaaaagatcg 2653 Query: 147 aacaatttgacaagggattctgatgcttccaaaaactcggacgttgaaatcttgttatcc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2654 aacaatttgacaagggattctgatgcttccaaaaactcggacgttgaaatcttgttatcc 2713 Query: 207 cgatccacaggaactgtctcgaaagacatcttcatttcatcgaaaaaggttgacatggcg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2714 cgatccacaggaactgtctcgaaagacatcttcatttcatcgaaaaaggttgacatggcg 2773 Query: 267 ttctaaatttatatctggaaaagtgtcaagagcaaatgaaaggcacttcaaaccacaaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2774 ttctaaatttatatctggaaaagtgtcaagagcaaatgaaaggcacttcaaaccacaaaa 2833 Query: 327 tgatcaacaaatactatgcagttaatgttgcttagttgcttttatccgatgtattactaa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2834 tgatcaacaaatactatgcagttaatgttgcttagttgcttttatccgatgtattactaa 2893 Query: 387 atgatgcacttttcagtgatgtggatacttgctcaatagttacttcaatattgatttgta 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2894 atgatgcacttttcagtgatgtggatacttgctcaatagttacttcaatattgatttgta 2953 Query: 447 gtgtggcttatcacatgatggatgaattggaaataatatttcacgttgaatttccatatg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2954 gtgtggcttatcacatgatggatgaattggaaataatatttcacgttgaatttccatatg 3013 Query: 507 tttacactggcaaagaaaattcgaaatttttcagatttcaaaacatcaacacgacaagac 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3014 tttacactggcaaagaaaattcgaaatttttcagatttcaaaacatcaacacgacaagac 3073 Query: 567 aagaatgaacgaacacgacatactacaattaaatgttgtcttaaggaggatccattctga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3074 aagaatgaacgaacacgacatactacaattaaatgttgtcttaaggaggatccattctga 3133 Query: 627 gaataggaaatgaaccacttttctaggagtatatctttagttggatatgtttatgtttat 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3134 gaataggaaatgaaccacttttctaggagtatatctttagttggatatgtttatgtttat 3193 Query: 687 gaaaggtgttaattaatatatatttgtcatctgaatgagatatgcaagatattaacctct 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3194 gaaaggtgttaattaatatatatttgtcatctgaatgagatatgcaagatattaacctct 3253 Query: 747 tccagcattcattctcttcagtctcaacttttcagccatagacattggtttattggatac 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3254 tccagcattcattctcttcagtctcaacttttcagccatagacattggtttattggatac 3313 Query: 807 cgnagcagtttgtgctggtgctgggtgctgggtttgga-tagaagg-acagggctagatc 864 || ||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||| Sbjct: 3314 cggagcagtttgtgctggtgct-ggtgctggggttggagtagaaggaacagggctagatc 3372 Query: 865 tagagctaccgttcttctttttcaaaaagttcttcgaattntcctttgctttnctancaa 924 ||||||||||||||||| ||||||| ||||||||||| || | ||||||||| | | ||| Sbjct: 3373 tagagctaccgttcttc-ttttcaagaagttcttcgatttct-ctttgctttcc-agcaa 3429 Query: 925 ttncgcctcttnccttgtggatnctttcacttncggcac 963 || || ||||| |||||| ||| ||||||| | |||||| Sbjct: 3430 tttcgtctctttccttgttgattctttcacgttcggcac 3468 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7628 Number of Sequences: 1807 Number of extensions: 7628 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 972 length of database: 10,358,551 effective HSP length: 16 effective length of query: 956 effective length of database: 10,329,639 effective search space: 9875134884 effective search space used: 9875134884 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)