BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZB10FM1.SCF screened BAC_end
         (948 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1625                                                        1538   0.0  

>3x_Contig1625 
          Length = 13618

 Score = 1538 bits (776), Expect = 0.0
 Identities = 845/862 (98%), Gaps = 6/862 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   tgcagatcggatatgcaacagttacttgaaactacttcttattcacgtgactgctttgag 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3276 tgcagatcggatatgcaacagttacttgaaactacttcttattcacgtgactgctttgag 3335

                                                                        
Query: 148  catgtgaaattgttccaaagcctaggtatataaacaacaatatatacgaaccgaataagg 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3336 catgtgaaattgttccaaagcctaggtatataaacaacaatatatacgaaccgaataagg 3395

                                                                        
Query: 208  acctcaaagggacaaaggggaaagcacttggttatctcaggtgcagacccatatctcgat 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3396 acctcaaagggacaaaggggaaagcacttggttatctcaggtgcagacccatatctcgat 3455

                                                                        
Query: 268  acactatttgctaaggaaactggttgcttaaccgaaaggcatcgcgatgactgaccaaca 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3456 acactatttgctaaggaaactggttgcttaaccgaaaggcatcgcgatgactgaccaaca 3515

                                                                        
Query: 328  gtcttttagaactcggttggccacgttcattgagtttttggaccctatcgcatcgactgt 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3516 gtcttttagaactcggttggccacgttcattgagtttttggaccctatcgcatcgactgt 3575

                                                                        
Query: 388  ccaatcctacagccagccctcgaaacaattcatcaaacagaaattaaccaatggtaaaca 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3576 ccaatcctacagccagccctcgaaacaattcatcaaacagaaattaaccaatggtaaaca 3635

                                                                        
Query: 448  gaagctccagtttagagatcaggaaatttcgcctcagttggccaatttcaagcagaagac 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3636 gaagctccagtttagagatcaggaaatttcgcctcagttggccaatttcaagcagaagac 3695

                                                                        
Query: 508  gttgaagaagttaaaaactattgataagcccttacaatcaattttctttcaaaatagctc 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3696 gttgaagaagttaaaaactattgataagcccttacaatcaattttctttcaaaatagctc 3755

                                                                        
Query: 568  aacacttgaaaaatcgttttatccattcactttgttcaatatattcctgatcgggttcct 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3756 aacacttgaaaaatcgttttatccattcactttgttcaatatattcctgatcgggttcct 3815

                                                                        
Query: 628  catcggtaggtaccctcaatatttccacatttactacactgctatgctatgtttgttgat 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3816 catcggtaggtaccctcaatatttccacatttactacactgctatgctatgtttgttgat 3875

                                                                        
Query: 688  gccggtgcgattttacacttactacaagacgaataatcattactttctggcagatttatg 747
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3876 gccggtgcgattttacacttactacaagacgaataatcattacttcctggcagatttatg 3935

                                                                        
Query: 748  ttatttcgttaatgcgatgtgcttgttattta-ttgggtactgccatcatctacacattt 806
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3936 ttatttcgttaatgcgatgtgcttgttatttatttgggtactgccatcatctacacattt 3995

                                                                        
Query: 807  gtaccagtcatgtttttgccttcacttttnggtactttgtcctttcgncattatcacgtg 866
            |||||||||||| |||||||||||||||| |||||||||||| |||| ||| ||||||||
Sbjct: 3996 gtaccagtcatg-ttttgccttcactttt-ggtactttgtcc-ttcgccataatcacgtg 4052

                                                                        
Query: 867  gcggnaactctcttgncattcattcggnggnataaatcacatnctggttcatccatatca 926
            |||| |||||||||| ||||||||||| ||   ||||||||| ||| |||||||||||||
Sbjct: 4053 gcgg-aactctcttgtcattcattcggtggataaaatcacatcctgtttcatccatatca 4111

                                  
Query: 927  tgccctccattgacattgnatt 948
            || ||||||||||||||| |||
Sbjct: 4112 tg-cctccattgacattgtatt 4132


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6045
Number of Sequences: 1807
Number of extensions: 6045
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)