BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZD02RM1.SCF screened BAC_end
         (968 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1526                                                        1637   0.0  

>3x_Contig1526 
          Length = 11842

 Score = 1637 bits (826), Expect = 0.0
 Identities = 905/926 (97%), Gaps = 5/926 (0%)
 Strand = Plus / Minus

                                                                        
Query: 43   gctttgataatcttggggaaatgatatgctgataacggtatctttgacattgaagtagca 102
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5460 gctttgataatcttggggaaatga-atgctgataacggtatctttgacattgaagtagca 5402

                                                                        
Query: 103  tccagttgtaaagagcgtagtcttgcttcaacttcgctttcagtcccaacttgtgacgag 162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5401 tccagttgtaaagagcgtagtcttgcttcaacttcgctttcagtcccaacttgtgacgag 5342

                                                                        
Query: 163  cactcgattcctaggatttttctatcttgagtcgatgctcgaacaggaagagcttttttg 222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||
Sbjct: 5341 cactcgattcctaggatttttctatcttgagtcgatgctcgaacaggaagagcattgatg 5282

                                                                        
Query: 223  aaaacctctattcctctatttctcatagctcttgaaagttctccaaatttaggatccata 282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5281 aaaacctctattcctctatttctcatagctcttgaaagttctccaaatttaggatccata 5222

                                                                        
Query: 283  gttaagaataatctaaaatcgcgatgtggctttaccactctgggttttccatcggtcaaa 342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5221 gttaagaataatctaaaatcgcgatgtggctttaccactctgggttttccatcggtcaaa 5162

                                                                        
Query: 343  ctacattcgtttatcatcaaagaaccatctgtttctaatagtgaattgattctatcgaga 402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5161 ctacattcgtttatcatcaaagaaccatctgtttctaatagtgaattgattctatcgaga 5102

                                                                        
Query: 403  actgatggagagcaaagattggcattgtctaaaatcaaccaatgaccctcctccacagcc 462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5101 actgatggagagcaaagattggcattgtctaaaatcaaccaatgaccctcctccacagcc 5042

                                                                        
Query: 463  ttgactagcataccgtcaaaccattcaaatttcacggctgcaggctttttcatgtgctcg 522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 ttgactagcataccgtcaaaccattcaaatttcacggctgcaggctttttcatgtgctcg 4982

                                                                        
Query: 523  ctcaaatcttgaatttccatattaatttcgtctatcgtagaatgcacttgagttaaggaa 582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4981 ctcaaatcttgaatttccatattaatttcgtctatcgtagaatgcacttgagttaaggaa 4922

                                                                        
Query: 583  tagaacttttggaataagtggacaaagtcagtgaaattaaaggaagacactgatgatttc 642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4921 tagaacttttggaataagtggacaaagtcagtgaaattaaaggaagacactgatgatttc 4862

                                                                        
Query: 643  ttaataaaatcatacaaagcaaatgctggagaaagtgcttcagtatctgttcctgtggaa 702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4861 ttaataaaatcatacaaagcaaatgctggagaaagtgcttcagtatctgttcctgtggaa 4802

                                                                        
Query: 703  agattgantggtattagttgttgcaagatttcagaaagtttctgaatgatgttcgcaact 762
            |||||||  |  |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4801 agattgatggtaattagttgttgcaagagttcagaaagtttctgaatgatgttcgcaact 4742

                                                                        
Query: 763  tttctgttcanatcaagttgttcatatccaccaagaatatccatgctatcaacatcgcta 822
            |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4741 tttctgttcaaatcaagttgttcatatccaccaagaatatccatgcgatcaacatcgcta 4682

                                                                        
Query: 823  tttcatcg-aaattcaattgtcttcttaccaatga-tgacgctatcaattncaccatgtc 880
             ||||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 4681 -ttcatcgaaaattcaattgtctgcttaccaatgattgacgctatcaatttcaccatgtc 4623

                                                                        
Query: 881  agttttacctgcattcgtcggtcctaccaatatc-acggncagttgtgtttgacacactt 939
            |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
Sbjct: 4622 agttttacctgcattcgtcggtcctaccaatatcaacggccagttgtgtttgacacacct 4563

                                      
Query: 940  tgatactgattcgtatacgttgaaat 965
            |  |||||||||||||||||||||||
Sbjct: 4562 tagtactgattcgtatacgttgaaat 4537


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7161
Number of Sequences: 1807
Number of extensions: 7161
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 968
length of database: 10,358,551
effective HSP length: 16
effective length of query: 952
effective length of database: 10,329,639
effective search space: 9833816328
effective search space used: 9833816328
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)