BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZD02RM1.SCF screened BAC_end (968 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1526 1637 0.0 >3x_Contig1526 Length = 11842 Score = 1637 bits (826), Expect = 0.0 Identities = 905/926 (97%), Gaps = 5/926 (0%) Strand = Plus / Minus Query: 43 gctttgataatcttggggaaatgatatgctgataacggtatctttgacattgaagtagca 102 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 5460 gctttgataatcttggggaaatga-atgctgataacggtatctttgacattgaagtagca 5402 Query: 103 tccagttgtaaagagcgtagtcttgcttcaacttcgctttcagtcccaacttgtgacgag 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5401 tccagttgtaaagagcgtagtcttgcttcaacttcgctttcagtcccaacttgtgacgag 5342 Query: 163 cactcgattcctaggatttttctatcttgagtcgatgctcgaacaggaagagcttttttg 222 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 5341 cactcgattcctaggatttttctatcttgagtcgatgctcgaacaggaagagcattgatg 5282 Query: 223 aaaacctctattcctctatttctcatagctcttgaaagttctccaaatttaggatccata 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5281 aaaacctctattcctctatttctcatagctcttgaaagttctccaaatttaggatccata 5222 Query: 283 gttaagaataatctaaaatcgcgatgtggctttaccactctgggttttccatcggtcaaa 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5221 gttaagaataatctaaaatcgcgatgtggctttaccactctgggttttccatcggtcaaa 5162 Query: 343 ctacattcgtttatcatcaaagaaccatctgtttctaatagtgaattgattctatcgaga 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5161 ctacattcgtttatcatcaaagaaccatctgtttctaatagtgaattgattctatcgaga 5102 Query: 403 actgatggagagcaaagattggcattgtctaaaatcaaccaatgaccctcctccacagcc 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5101 actgatggagagcaaagattggcattgtctaaaatcaaccaatgaccctcctccacagcc 5042 Query: 463 ttgactagcataccgtcaaaccattcaaatttcacggctgcaggctttttcatgtgctcg 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5041 ttgactagcataccgtcaaaccattcaaatttcacggctgcaggctttttcatgtgctcg 4982 Query: 523 ctcaaatcttgaatttccatattaatttcgtctatcgtagaatgcacttgagttaaggaa 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4981 ctcaaatcttgaatttccatattaatttcgtctatcgtagaatgcacttgagttaaggaa 4922 Query: 583 tagaacttttggaataagtggacaaagtcagtgaaattaaaggaagacactgatgatttc 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4921 tagaacttttggaataagtggacaaagtcagtgaaattaaaggaagacactgatgatttc 4862 Query: 643 ttaataaaatcatacaaagcaaatgctggagaaagtgcttcagtatctgttcctgtggaa 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4861 ttaataaaatcatacaaagcaaatgctggagaaagtgcttcagtatctgttcctgtggaa 4802 Query: 703 agattgantggtattagttgttgcaagatttcagaaagtttctgaatgatgttcgcaact 762 ||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4801 agattgatggtaattagttgttgcaagagttcagaaagtttctgaatgatgttcgcaact 4742 Query: 763 tttctgttcanatcaagttgttcatatccaccaagaatatccatgctatcaacatcgcta 822 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4741 tttctgttcaaatcaagttgttcatatccaccaagaatatccatgcgatcaacatcgcta 4682 Query: 823 tttcatcg-aaattcaattgtcttcttaccaatga-tgacgctatcaattncaccatgtc 880 ||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 4681 -ttcatcgaaaattcaattgtctgcttaccaatgattgacgctatcaatttcaccatgtc 4623 Query: 881 agttttacctgcattcgtcggtcctaccaatatc-acggncagttgtgtttgacacactt 939 |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | Sbjct: 4622 agttttacctgcattcgtcggtcctaccaatatcaacggccagttgtgtttgacacacct 4563 Query: 940 tgatactgattcgtatacgttgaaat 965 | ||||||||||||||||||||||| Sbjct: 4562 tagtactgattcgtatacgttgaaat 4537 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7161 Number of Sequences: 1807 Number of extensions: 7161 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 968 length of database: 10,358,551 effective HSP length: 16 effective length of query: 952 effective length of database: 10,329,639 effective search space: 9833816328 effective search space used: 9833816328 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)